DIG1/YPL049C Literature Guide Help

Other names published for DIG1: RST1, YPL049C

DIG1 - Additional Literature (48)

ReferenceOther Genes Addressed
Mirzaei H, et al.  (2013) Systematic measurement of transcription factor-DNA interactions by targeted mass spectrometry identifies candidate gene regulatory proteins. Proc Natl Acad Sci U S A 110(9):3645-50
Ayer A, et al.  (2012) A genome-wide screen in yeast identifies specific oxidative stress genes required for the maintenance of sub-cellular redox homeostasis. PLoS One 7(9):e44278
Geijer C, et al.  (2012) Time course gene expression profiling of yeast spore germination reveals a network of transcription factors orchestrating the global response. BMC Genomics 13(1):554
Ryan O, et al.  (2012) Global gene deletion analysis exploring yeast filamentous growth. Science 337(6100):1353-6
Vohradsky J  (2012) Stochastic simulation for the inference of transcriptional control network of yeast cyclins genes. Nucleic Acids Res 40(15):7096-103
Wang L, et al.  (2012) Integrating phosphorylation network with transcriptional network reveals novel functional relationships. PLoS One 7(3):e33160
Miller C, et al.  (2011) Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol 7():458
Ohkuni K and Kitagawa K  (2011) Endogenous transcription at the centromere facilitates centromere activity in budding yeast. Curr Biol 21(20):1695-703
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Granek JA and Magwene PM  (2010) Environmental and genetic determinants of colony morphology in yeast. PLoS Genet 6(1):e1000823
Heise B, et al.  (2010) The TEA transcription factor Tec1 confers promoter-specific gene regulation by Ste12-dependent and -independent mechanisms. Eukaryot Cell 9(4):514-31
Louw C, et al.  (2010) Regulation of endo-polygalacturonase activity in Saccharomyces cerevisiae. FEMS Yeast Res 10(1):44-57
Morris RT, et al.  (2010) Ceres: software for the integrated analysis of transcription factor binding sites and nucleosome positions in Saccharomyces cerevisiae. Bioinformatics 26(2):168-74
Pincus D, et al.  (2010) Reagents for investigating MAPK signalling in model yeast species. Yeast 27(7):423-30
Tsankov AM, et al.  (2010) The role of nucleosome positioning in the evolution of gene regulation. PLoS Biol 8(7):e1000414
Wu C, et al.  (2010) Composite functional module inference: detecting cooperation between transcriptional regulation and protein interaction by mantel test. BMC Syst Biol 4():82
Wu CY, et al.  (2010) Control of transcription by cell size. PLoS Biol 8(11):e1000523
Everett L, et al.  (2009) PTM-Switchboard--a database of posttranslational modifications of transcription factors, the mediating enzymes and target genes. Nucleic Acids Res 37(Database issue):D66-71
Gordan R, et al.  (2009) Distinguishing direct versus indirect transcription factor-DNA interactions. Genome Res 19(11):2090-100
Hu B, et al.  (2009) Mechanisms and constraints on yeast MAPK signaling specificity. Biophys J 96(12):4755-63
Huang SS and Fraenkel E  (2009) Integrating proteomic, transcriptional, and interactome data reveals hidden components of signaling and regulatory networks. Sci Signal 2(81):ra40
Mody A, et al.  (2009) Modularity of MAP kinases allows deformation of their signalling pathways. Nat Cell Biol 11(4):484-91
Swamy KB, et al.  (2009) Impact of DNA-binding position variants on yeast gene expression. Nucleic Acids Res 37(21):6991-7001
Torma A, et al.  (2009) Concordant gene regulation related to perturbations of three GDP-mannose-related genes. FEMS Yeast Res 9(1):63-72
Cheung V, et al.  (2008) Chromatin- and Transcription-Related Factors Repress Transcription from within Coding Regions throughout the Saccharomyces cerevisiae Genome. PLoS Biol 6(11):e277
Lu CC, et al.  (2008) Extracting transcription factor binding sites from unaligned gene sequences with statistical models. BMC Bioinformatics 9 Suppl 12:S7
Nyswaner KM, et al.  (2008) Chromatin-associated genes protect the yeast genome from ty1 insertional mutagenesis. Genetics 178(1):197-214
Smith EN and Kruglyak L  (2008) Gene-environment interaction in yeast gene expression. PLoS Biol 6(4):e83
Wu WS and Li WH  (2008) Identifying gene regulatory modules of heat shock response in yeast. BMC Genomics 9:439