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HMR - Additional Literature (206)

ReferenceOther Genes Addressed
Dayarian A and Sengupta AM  (2013) Titration and hysteresis in epigenetic chromatin silencing. Phys Biol 10(3):036005
Fazly A, et al.  (2012) Histone chaperone Rtt106 promotes nucleosome formation using (H3-H4)2 tetramers. J Biol Chem 287(14):10753-60
Li J, et al.  (2012) Regulation of Budding Yeast Mating-Type Switching Donor Preference by the FHA Domain of Fkh1. PLoS Genet 8(4):e1002630
Motwani T, et al.  (2012) Sir3 and epigenetic inheritance of silent chromatin in Saccharomyces cerevisiae. Mol Cell Biol 32(14):2784-93
Nagesh P, et al.  (2012) The SUMO E3 ligase Siz2 exerts a locus-dependent effect on gene silencing in Saccharomyces cerevisiae. Eukaryot Cell 11(4):452-62
Coic E, et al.  (2011) Dynamics of homology searching during gene conversion in Saccharomyces cerevisiae revealed by donor competition. Genetics 189(4):1225-33
Dubarry M, et al.  (2011) Tight protein-DNA interactions favor gene silencing. Genes Dev 25(13):1365-70
Gordon JL, et al.  (2011) Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Proc Natl Acad Sci U S A 108(50):20024-9
Osborne EA, et al.  (2011) Inaugural Article: Symmetry, asymmetry, and kinetics of silencing establishment in Saccharomyces cerevisiae revealed by single-cell optical assays. Proc Natl Acad Sci U S A 108(4):1209-16
Sitaraman R  (2011) The treasure of the humble: Lessons from Baker's yeast. Biochem Mol Biol Educ 39(4):261-6
Yu Q, et al.  (2011) Roles of chromatin remodeling factors in the formation and maintenance of heterochromatin structure. J Biol Chem 286(16):14659-69
Lynch PJ and Rusche LN  (2010) An auxiliary silencer and a boundary element maintain high levels of silencing proteins at HMR in Saccharomyces cerevisiae. Genetics 185(1):113-27
Miller A, et al.  (2010) Proliferating cell nuclear antigen (PCNA) is required for cell cycle-regulated silent chromatin on replicated and nonreplicated genes. J Biol Chem 285(45):35142-54
Mukhopadhyay S, et al.  (2010) Locus dependence in epigenetic chromatin silencing. Biosystems 102(1):49-54
Ozaydin B and Rine J  (2010) Expanded Roles of the Origin Recognition Complex in the Architecture and Function of Silenced Chromatin in Saccharomyces cerevisiae. Mol Cell Biol 30(3):626-39
Weber JM and Ehrenhofer-Murray AE  (2010) Design of a minimal silencer for the silent mating-type locus HML of Saccharomyces cerevisiae. Nucleic Acids Res 38(22):7991-8000
Zhou BO, et al.  (2010) SWR1 complex poises heterochromatin boundaries for antisilencing activity propagation. Mol Cell Biol 30(10):2391-400
Zill OA, et al.  (2010) Co-evolution of transcriptional silencing proteins and the DNA elements specifying their assembly. PLoS Biol 8(11):e1000550
Biswas M, et al.  (2009) Limiting the extent of the RDN1 heterochromatin domain by a silencing barrier and Sir2 protein levels in Saccharomyces cerevisiae. Mol Cell Biol 29(10):2889-98
Bystricky K, et al.  (2009) Regulation of nuclear positioning and dynamics of the silent mating type loci by the yeast Ku70/Ku80 complex. Mol Cell Biol 29(3):835-48
Gallagher JE, et al.  (2009) Elaboration, diversification and regulation of the sir1 family of silencing proteins in Saccharomyces. Genetics 181(4):1477-91
Hou Z, et al.  (2009) Phylogenetic conservation and homology modeling help reveal a novel domain within the budding yeast heterochromatin protein Sir1. Mol Cell Biol 29(3):687-702
Lynch PJ and Rusche LN  (2009) A silencer promotes the assembly of silenced chromatin independently of recruitment. Mol Cell Biol 29(1):43-56
Marvin ME, et al.  (2009) The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences. Genetics 183(2):453-67, 1SI-13SI
Singh I, et al.  (2009) Stringent mating-type-regulated auxotrophy increases the accuracy of systematic genetic interaction screens with Saccharomyces cerevisiae mutant arrays. Genetics 181(1):289-300
Teytelman L, et al.  (2009) Impact of chromatin structures on DNA processing for genomic analyses. PLoS One 4(8):e6700
Benbow SZ and Dubois ML  (2008) The dosage of chromatin proteins affects transcriptional silencing and DNA repair in Saccharomyces cerevisiae. FEBS Lett 582(4):497-502
Casey L, et al.  (2008) Conversion of a Replication Origin to a Silencer through a Pathway Shared by a Forkhead Transcription Factor and an S Phase Cyclin. Mol Biol Cell 19(2):608-22
Denisenko O and Bomsztyk K  (2008) Epistatic interaction between the K-homology domain protein HEK2 and SIR1 at HMR and telomeres in yeast. J Mol Biol 375(4):1178-87
McClure JM, et al.  (2008) Pnc1p-Mediated Nicotinamide Clearance Modifies the Epigenetic Properties of rDNA Silencing in Saccharomyces cerevisiae. Genetics 180(2):797-810