LSR1 Literature Guide Help

Other names published for LSR1: snR20, U2 snRNA, U2

LSR1 Literature Curation Summary

Curated References for LSR1: 110

Date of last curation: 2013-06-06

ReferenceOther Genes Addressed
Chiang TW and Cheng SC  (2013) A weak spliceosome-binding domain of Yju2 functions in the first step and bypasses Prp16 in the second step of splicing. Mol Cell Biol 33(9):1746-55
Freeberg MA, et al.  (2013) Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae. Genome Biol 14(2):R13
Li X, et al.  (2013) Comprehensive in vivo RNA-binding site analyses reveal a role of Prp8 in spliceosomal assembly. Nucleic Acids Res 41(6):3805-18
Aulds J, et al.  (2012) Global identification of new substrates for the yeast endoribonuclease, RNase mitochondrial RNA processing (MRP). J Biol Chem 287(44):37089-97
Burke JE, et al.  (2012) Structure of the yeast U2/U6 snRNA complex. RNA 18(4):673-83
Coltri PP and Oliveira CC  (2012) Cwc24p Is a General Saccharomyces cerevisiae Splicing Factor Required for the Stable U2 snRNP Binding to Primary Transcripts. PLoS One 7(9):e45678
Egloff S  (2012) Role of Ser7 phosphorylation of the CTD during transcription of snRNA genes. RNA Biol 9(8):1033-8
Ohrt T, et al.  (2012) Prp2-mediated protein rearrangements at the catalytic core of the spliceosome as revealed by dcFCCS. RNA 18(6):1244-56
Parker R  (2012) RNA Degradation in Saccharomyces cerevisae. Genetics 191(3):671-702
Popovic M, et al.  (2012) Impact of base pair identity 5' to the spliceosomal branch site adenosine on branch site conformation. RNA 18(11):2093-103
Schneider C, et al.  (2012) Transcriptome-wide analysis of exosome targets. Mol Cell 48(3):422-33
Horowitz DS  (2011) The mechanism of the second step of pre-mRNA splicing. Wiley Interdiscip Rev RNA 3(3):331-50
Hoskins AA, et al.  (2011) New insights into the spliceosome by single molecule fluorescence microscopy. Curr Opin Chem Biol 15(6):864-70
Jamonnak N, et al.  (2011) Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing. RNA 17(11):2011-25
Kasahara K, et al.  (2011) Hmo1 directs pre-initiation complex assembly to an appropriate site on its target gene promoters by masking a nucleosome-free region. Nucleic Acids Res 39(10):4136-50
Kudla G, et al.  (2011) Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast. Proc Natl Acad Sci U S A 108(24):10010-5
Martin-Tumasz S, et al.  (2011) A novel occluded RNA recognition motif in Prp24 unwinds the U6 RNA internal stem loop. Nucleic Acids Res 39(17):7837-47
McKay SL and Johnson TL  (2011) An Investigation of a Role for U2 snRNP Spliceosomal Components in Regulating Transcription. PLoS One 6(1):e16077
Schwer B, et al.  (2011) Composition of yeast snRNPs and snoRNPs in the absence of trimethylguanosine caps reveals nuclear cap binding protein as a gained U1 component implicated in the cold-sensitivity of tgs1? cells. Nucleic Acids Res 39(15):6715-28
Wu G, et al.  (2011) Functions and mechanisms of spliceosomal small nuclear RNA pseudouridylation. Wiley Interdiscip Rev RNA 2(4):571-81
Wu G, et al.  (2011) U2 snRNA is inducibly pseudouridylated at novel sites by Pus7p and snR81 RNP. EMBO J 30(1):79-89
Yu AT, et al.  (2011) Pseudouridines in spliceosomal snRNAs. Protein Cell 2(9):712-25
Alexander RD, et al.  (2010) Splicing-dependent RNA polymerase pausing in yeast. Mol Cell 40(4):582-93
Karijolich J and Yu YT  (2010) Spliceosomal snRNA modifications and their function. RNA Biol 7(2):192-204
Perriman R and Ares M Jr  (2010) Invariant U2 snRNA nucleotides form a stem loop to recognize the intron early in splicing. Mol Cell 38(3):416-27
Bergkessel M, et al.  (2009) SnapShot: Formation of mRNPs. Cell 136(4):794, 794.e1
Bohnsack MT, et al.  (2009) Prp43 Bound at Different Sites on the Pre-rRNA Performs Distinct Functions in Ribosome Synthesis. Mol Cell 36(4):583-592
Frazer LN, et al.  (2009) Analysis of synthetic lethality reveals genetic interactions between the GTPase Snu114p and snRNAs in the catalytic core of the Saccharomyces cerevisiae spliceosome. Genetics 183(2):497-515-1SI-4SI
Khanna M, et al.  (2009) A systematic characterization of Cwc21, the yeast ortholog of the human spliceosomal protein SRm300. RNA 15(12):2174-85
Luhtala N and Parker R  (2009) LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels. Nucleic Acids Res 37(16):5529-36