ARS317 Literature Guide Help

Other names published for ARS317: HMR-E ARS

ARS317 Literature Curation Summary

Curated References for ARS317: 34

Date of last curation: 2013-02-27

ReferenceOther Genes Addressed
Finn KJ and Li JJ  (2013) Single-stranded annealing induced by re-initiation of replication origins provides a novel and efficient mechanism for generating copy number expansion via non-allelic homologous recombination. PLoS Genet 9(1):e1003192
Chisamore-Robert P, et al.  (2012) Directional telomeric silencing and lack of canonical B1 elements in two silencer Autonomously Replicating Sequences in S. cerevisiae. BMC Mol Biol 13():34
Dhar MK, et al.  (2012) Structure, replication efficiency and fragility of yeast ARS elements. Res Microbiol 163(4):243-53
Motwani T, et al.  (2012) Sir3 and epigenetic inheritance of silent chromatin in Saccharomyces cerevisiae. Mol Cell Biol 32(14):2784-93
Ruben GJ, et al.  (2011) Nucleoporin Mediated Nuclear Positioning and Silencing of HMR. PLoS One 6(7):e21923
Lynch PJ and Rusche LN  (2010) An auxiliary silencer and a boundary element maintain high levels of silencing proteins at HMR in Saccharomyces cerevisiae. Genetics 185(1):113-27
Lynch PJ and Rusche LN  (2009) A silencer promotes the assembly of silenced chromatin independently of recruitment. Mol Cell Biol 29(1):43-56
Rehman MA and Yankulov K  (2009) The dual role of autonomously replicating sequences as origins of replication and as silencers. Curr Genet 55(4):357-63
Chang F, et al.  (2008) Analysis of chromosome III replicators reveals an unusual structure for the ARS318 silencer origin and a conserved WTW sequence within the origin recognition complex binding site. Mol Cell Biol 28(16):5071-81
Teytelman L, et al.  (2008) Silent but not static: accelerated base-pair substitution in silenced chromatin of budding yeasts. PLoS Genet 4(11):e1000247
Valenzuela L, et al.  (2008) Long-range communication between the silencers of HMR. Mol Cell Biol 28(6):1924-35
Dershowitz A, et al.  (2007) Linear derivatives of Saccharomyces cerevisiae chromosome III can be maintained in the absence of autonomously replicating sequence elements. Mol Cell Biol 27(13):4652-63
McConnell KH, et al.  (2006) Tolerance of Sir1p/origin recognition complex-dependent silencing for enhanced origin firing at HMRa. Mol Cell Biol 26(5):1955-66
Valenzuela L, et al.  (2006) Analyses of SUM1-1-mediated long-range repression. Genetics 172(1):99-112
Zou Y, et al.  (2006) Asymmetric positioning of nucleosomes and directional establishment of transcriptionally silent chromatin by Saccharomyces cerevisiae silencers. Mol Cell Biol 26(20):7806-19
Zou Y, et al.  (2006) Position effect on the directionality of silencer function in Saccharomyces cerevisiae. Genetics 174(1):203-13
Ak P and Benham CJ  (2005) Susceptibility to superhelically driven DNA duplex destabilization: a highly conserved property of yeast replication origins. PLoS Comput Biol 1(1):e7
Antequera F  (2004) Genomic specification and epigenetic regulation of eukaryotic DNA replication origins. EMBO J 23(22):4365-70
Weinreich M, et al.  (2004) The activities of eukaryotic replication origins in chromatin. Biochim Biophys Acta 1677(1-3):142-57
Palacios DeBeer MA, et al.  (2003) Differential DNA affinity specifies roles for the origin recognition complex in budding yeast heterochromatin. Genes Dev 17(15):1817-22
Poloumienko A, et al.  (2001) Completion of replication map of Saccharomyces cerevisiae chromosome III. Mol Biol Cell 12(11):3317-27
Marilley M  (2000) Structure-function relationships in replication origins of the yeast Saccharomyces cerevisiae: higher-order structural organization of DNA in regions flanking the ARS consensus sequence. Mol Gen Genet 263(5):854-66
Hara A, et al.  (1999) Construction of an autonomously replicating plasmid in n-alkane-assimilating yeast, Candida tropicalis. J Biosci Bioeng 87(6):717-20
Loo S, et al.  (1995) Roles of ABF1, NPL3, and YCL54 in silencing in Saccharomyces cerevisiae. Genetics 141(3):889-902
Micklem G, et al.  (1993) Yeast origin recognition complex is involved in DNA replication and transcriptional silencing. Nature 366(6450):87-9
Laurenson P and Rine J  (1991) SUM1-1: a suppressor of silencing defects in Saccharomyces cerevisiae. Genetics 129(3):685-96
McNally FJ and Rine J  (1991) A synthetic silencer mediates SIR-dependent functions in Saccharomyces cerevisiae. Mol Cell Biol 11(11):5648-59
Chambers A, et al.  (1990) ARS binding factor 1 binds adjacent to RAP1 at the UASs of the yeast glycolytic genes PGK and PYK1. Nucleic Acids Res 18(18):5393-9
Diffley JF and Stillman B  (1988) Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer. Proc Natl Acad Sci U S A 85(7):2120-4
Kimmerly W, et al.  (1988) Roles of two DNA-binding factors in replication, segregation and transcriptional repression mediated by a yeast silencer. EMBO J 7(7):2241-53