tF(GAA)F Literature Guide Help

tF(GAA)F Literature Curation Summary

Curated References for tF(GAA)F: 132

Date of last curation: 2013-01-28

Results: 1 - 30 of 132 records
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ReferenceOther Genes Addressed
Guy MP, et al.  (2012) Yeast Trm7 interacts with distinct proteins for critical modifications of the tRNAPhe anticodon loop. RNA 18(10):1921-33
Kumbhar NM, et al.  (2012) Structural significance of hypermodified nucleic acid base hydroxywybutine (OHyW) which occur at 37th position in the anticodon loop of yeast tRNA(Phe). J Mol Graph Model 38():174-85
Jack K, et al.  (2011) rRNA Pseudouridylation Defects Affect Ribosomal Ligand Binding and Translational Fidelity from Yeast to Human Cells. Mol Cell 44(4):660-6
Karkusiewicz I, et al.  (2011) Maf1 protein, repressor of RNA polymerase III, indirectly affects tRNA processing. J Biol Chem 286(45):39478-88
Korennykh AV, et al.  (2011) Structural and functional basis for RNA cleavage by Ire1. BMC Biol 9(1):47
Krivos KL, et al.  (2011) Removal of 3'-phosphate group by bacterial alkaline phosphatase improves oligonucleotide sequence coverage of RNase digestion products analyzed by collision-induced dissociation mass spectrometry. Rapid Commun Mass Spectrom 25(23):3609-16
Ohira T and Suzuki T  (2011) Retrograde nuclear import of tRNA precursors is required for modified base biogenesis in yeast. Proc Natl Acad Sci U S A 108(26):10502-7
Seetin MG and Mathews DH  (2011) Automated RNA tertiary structure prediction from secondary structure and low-resolution restraints.LID - 10.1002/jcc.21806 [doi] J Comput Chem ()
Serikov R, et al.  (2011) Mechanism of Antisense Oligonucleotide Interaction with Natural RNAs. J Biomol Struct Dyn 29(1):27-50
Hopper AK, et al.  (2010) Cellular dynamics of tRNAs and their genes. FEBS Lett 584(2):310-7
Ouameur AA, et al.  (2010) Probing tRNA interaction with biogenic polyamines. RNA 16(10):1968-79
Rambo RP and Tainer JA  (2010) Improving small-angle X-ray scattering data for structural analyses of the RNA world. RNA 16(3):638-46
Staschke KA, et al.  (2010) Integration of general amino acid control and target of rapamycin (TOR) regulatory pathways in nitrogen assimilation in yeast. J Biol Chem 285(22):16893-911
Taoka M, et al.  (2010) In-Gel Digestion for Mass Spectrometric Characterization of RNA from Fluorescently Stained Polyacrylamide Gels. Anal Chem 82(18):7795-7803
Ye S, et al.  (2010) Chemical aminoacylation of tRNAs with fluorinated amino acids for in vitro protein mutagenesis. Beilstein J Org Chem 6():40
Chan PP and Lowe TM  (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7
Hayrapetyan A, et al.  (2009) Effect of a quaternary pentamine on RNA stabilization and enzymatic methylation. Biol Chem 390(9):851-61
Islam MM, et al.  (2009) RNA targeting through binding of small molecules: Studies on t-RNA binding by the cytotoxic protoberberine alkaloid coralyne. Mol Biosyst 5(3):244-54
Kauffmann AD, et al.  (2009) Improvement of RNA secondary structure prediction using RNase H cleavage and randomized oligonucleotides. Nucleic Acids Res 37(18):e121
Li Y and Zhou H  (2009) tRNAs as regulators in gene expression. Sci China C Life Sci 52(3):245-52
McFarlane RJ and Whitehall SK  (2009) tRNA genes in eukaryotic genome organization and reorganization. Cell Cycle 8(19):3102-6
Nakayama H, et al.  (2009) Ariadne: a database search engine for identification and chemical analysis of RNA using tandem mass spectrometry data. Nucleic Acids Res 37(6):e47
Schrader JM, et al.  (2009) Understanding the sequence specificity of tRNA binding to elongation factor Tu using tRNA mutagenesis. J Mol Biol 386(5):1255-64
Umitsu M, et al.  (2009) Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2. Proc Natl Acad Sci U S A 106(37):15616-21
Wang X, et al.  (2009) Mutation in MTO1 involved in tRNA modification impairs mitochondrial RNA metabolism in the yeast Saccharomyces cerevisiae. Mitochondrion 9(3):180-5
Copela LA, et al.  (2008) Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. RNA 14(6):1214-27
Frazer-Abel AA and Hagerman PJ  (2008) Core flexibility of a truncated metazoan mitochondrial tRNA. Nucleic Acids Res 36(17):5472-81
Jenek M and Kierzek E  (2008) Isoenergetic microarray mapping - the advantages of this method in studying the structure of Saccharomyces cerevisiae tRNAPhe. Nucleic Acids Symp Ser (Oxf) (52):219-20
Meskauskas A and Dinman JD  (2008) Ribosomal protein L3 functions as a 'rocker switch' to aid in coordinating of large subunit-associated functions in eukaryotes and Archaea. Nucleic Acids Res 36(19):6175-86
Thompson DM, et al.  (2008) tRNA cleavage is a conserved response to oxidative stress in eukaryotes. RNA 14(10):2095-103
Results: 1 - 30 of 132 records
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