tE(UUC)G2 Literature Guide Help

tE(UUC)G2 Literature Curation Summary

Curated References for tE(UUC)G2: 31

Date of last curation: 2013-01-28

ReferenceOther Genes Addressed
Iben JR and Maraia RJ  (2012) tRNAomics: tRNA gene copy number variation and codon use provide bioinformatic evidence of a new anticodon:codon wobble pair in a eukaryote. RNA 18(7):1358-72
Jain R, et al.  (2011) Substrate specificity and mutational analysis of Kluyveromyces lactis gamma-toxin, a eukaryal tRNA anticodon nuclease. RNA 17(7):1336-43
Yi C and Pan T  (2011) Cellular dynamics of RNA modification. Acc Chem Res 44(12):1380-8
Yukawa Y, et al.  (2011) A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes. Genomics 97(3):166-72
Hopper AK, et al.  (2010) Cellular dynamics of tRNAs and their genes. FEBS Lett 584(2):310-7
Ouameur AA, et al.  (2010) Probing tRNA interaction with biogenic polyamines. RNA 16(10):1968-79
Chan PP and Lowe TM  (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7
Li Y and Zhou H  (2009) tRNAs as regulators in gene expression. Sci China C Life Sci 52(3):245-52
McFarlane RJ and Whitehall SK  (2009) tRNA genes in eukaryotic genome organization and reorganization. Cell Cycle 8(19):3102-6
Noma A, et al.  (2009) Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions. Nucleic Acids Res 37(4):1335-52
Wang X, et al.  (2009) Mutation in MTO1 involved in tRNA modification impairs mitochondrial RNA metabolism in the yeast Saccharomyces cerevisiae. Mitochondrion 9(3):180-5
Zaborske JM, et al.  (2009) Genome-wide Analysis of tRNA Charging and Activation of the eIF2 Kinase Gcn2p. J Biol Chem 284(37):25254-67
Huang B, et al.  (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94
Nakai Y, et al.  (2008) Thio-modification of Yeast Cytosolic tRNA Requires a Ubiquitin-related System That Resembles Bacterial Sulfur Transfer Systems. J Biol Chem 283(41):27469-76
Thompson DM, et al.  (2008) tRNA cleavage is a conserved response to oxidative stress in eukaryotes. RNA 14(10):2095-103
Bjork GR, et al.  (2007) A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast. RNA 13(8):1245-55
Ciesla M, et al.  (2007) Maf1 Is Involved in Coupling Carbon Metabolism to RNA Polymerase III Transcription. Mol Cell Biol 27(21):7693-702
Jako E, et al.  (2007) In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership. Nucleic Acids Res 35(16):5593-609
Wang X, et al.  (2007) Deletion of the MTO2 gene related to tRNA modification causes a failure in mitochondrial RNA metabolism in the yeast Saccharomyces cerevisiae. FEBS Lett 581(22):4228-34
Goodenbour JM and Pan T  (2006) Diversity of tRNA genes in eukaryotes. Nucleic Acids Res 34(21):6137-46
Hopper AK  (2006) Cellular dynamics of small RNAs. Crit Rev Biochem Mol Biol 41(1):3-19
Marck C, et al.  (2006) The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications. Nucleic Acids Res 34(6):1816-35
Lu J, et al.  (2005) The Kluyveromyces lactis gamma-toxin targets tRNA anticodons. RNA 11(11):1648-54
Giuliodori S, et al.  (2003) A composite upstream sequence motif potentiates tRNA gene transcription in yeast. J Mol Biol 333(1):1-20
Hopper AK and Phizicky EM  (2003) tRNA transfers to the limelight. Genes Dev 17(2):162-80
Ryckelynck M, et al.  (2003) Yeast tRNA(Asp) charging accuracy is threatened by the N-terminal extension of aspartyl-tRNA synthetase. J Biol Chem 278(11):9683-90
Thompson M, et al.  (2003) Nucleolar clustering of dispersed tRNA genes. Science 302(5649):1399-401
Hani J and Feldmann H  (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96
Percudani R, et al.  (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30
Wrzesinski J, et al.  (1995) Specific RNA cleavages induced by manganese ions. FEBS Lett 374(1):62-8