Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
73 |
4.6% |
| Arg[R] |
67 |
4.2% |
| Asn[N] |
115 |
7.2% |
| Asp[D] |
97 |
6.0% |
| Cys[C] |
13 |
0.8% |
| Gln[Q] |
72 |
4.5% |
| Glu[E] |
83 |
5.2% |
| Gly[G] |
60 |
3.7% |
| His[H] |
58 |
3.6% |
| Ile[I] |
113 |
7.0% |
| Leu[L] |
124 |
7.7% |
| Lys[K] |
110 |
6.9% |
| Met[M] |
30 |
1.9% |
| Phe[F] |
48 |
3.0% |
| Pro[P] |
107 |
6.7% |
| Ser[S] |
167 |
10.4% |
| Thr[T] |
120 |
7.5% |
| Trp[W] |
13 |
0.8% |
| Tyr[Y] |
68 |
4.2% |
| Val[V] |
66 |
4.1% |
| Total Length |
1604 |
|
| Instability index (II) |
50.20 |
| This classifies the protein as unstable |
|
| Carbon |
8016 |
| Hydrogen |
12543 |
| Nitrogen |
2231 |
| Oxygen |
2507 |
| Sulfur |
43 |
| Total number of atoms |
25340 |
| Formula = C8016H12543N2231O2507S43 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
173570 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
172820 M-1 cm-1 |
| assuming all Cys residues are reduced |
172820 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
173570 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
