Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
53 |
2.9% |
| Arg[R] |
85 |
4.7% |
| Asn[N] |
160 |
8.9% |
| Asp[D] |
123 |
6.8% |
| Cys[C] |
27 |
1.5% |
| Gln[Q] |
57 |
3.2% |
| Glu[E] |
127 |
7.0% |
| Gly[G] |
67 |
3.7% |
| His[H] |
49 |
2.7% |
| Ile[I] |
164 |
9.1% |
| Leu[L] |
139 |
7.7% |
| Lys[K] |
182 |
10.1% |
| Met[M] |
34 |
1.9% |
| Phe[F] |
51 |
2.8% |
| Pro[P] |
55 |
3.1% |
| Ser[S] |
136 |
7.5% |
| Thr[T] |
121 |
6.7% |
| Trp[W] |
10 |
0.6% |
| Tyr[Y] |
71 |
3.9% |
| Val[V] |
91 |
5.0% |
| Total Length |
1802 |
|
| Instability index (II) |
39.32 |
| This classifies the protein as stable |
|
| Carbon |
9140 |
| Hydrogen |
14638 |
| Nitrogen |
2564 |
| Oxygen |
2848 |
| Sulfur |
61 |
| Total number of atoms |
29251 |
| Formula = C9140H14638N2564O2848S61 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
162415 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
160790 M-1 cm-1 |
| assuming all Cys residues are reduced |
160790 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
162415 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
