Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
47 |
4.1% |
| Arg[R] |
52 |
4.5% |
| Asn[N] |
72 |
6.2% |
| Asp[D] |
70 |
6.1% |
| Cys[C] |
11 |
1.0% |
| Gln[Q] |
45 |
3.9% |
| Glu[E] |
63 |
5.5% |
| Gly[G] |
48 |
4.2% |
| His[H] |
40 |
3.5% |
| Ile[I] |
91 |
7.9% |
| Leu[L] |
103 |
8.9% |
| Lys[K] |
96 |
8.3% |
| Met[M] |
19 |
1.6% |
| Phe[F] |
33 |
2.9% |
| Pro[P] |
62 |
5.4% |
| Ser[S] |
113 |
9.8% |
| Thr[T] |
84 |
7.3% |
| Trp[W] |
10 |
0.9% |
| Tyr[Y] |
51 |
4.4% |
| Val[V] |
45 |
3.9% |
| Total Length |
1155 |
|
| Instability index (II) |
44.74 |
| This classifies the protein as unstable |
|
| Carbon |
5841 |
| Hydrogen |
9228 |
| Nitrogen |
1614 |
| Oxygen |
1787 |
| Sulfur |
30 |
| Total number of atoms |
18500 |
| Formula = C5841H9228N1614O1787S30 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
131615 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
130990 M-1 cm-1 |
| assuming all Cys residues are reduced |
130990 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
131615 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
