Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
88 |
9.1% |
| Arg[R] |
41 |
4.2% |
| Asn[N] |
42 |
4.3% |
| Asp[D] |
56 |
5.8% |
| Cys[C] |
9 |
0.9% |
| Gln[Q] |
84 |
8.7% |
| Glu[E] |
74 |
7.6% |
| Gly[G] |
23 |
2.4% |
| His[H] |
23 |
2.4% |
| Ile[I] |
53 |
5.5% |
| Leu[L] |
103 |
10.6% |
| Lys[K] |
57 |
5.9% |
| Met[M] |
23 |
2.4% |
| Phe[F] |
26 |
2.7% |
| Pro[P] |
38 |
3.9% |
| Ser[S] |
78 |
8.1% |
| Thr[T] |
68 |
7.0% |
| Trp[W] |
6 |
0.6% |
| Tyr[Y] |
23 |
2.4% |
| Val[V] |
53 |
5.5% |
| Total Length |
968 |
|
| Instability index (II) |
45.71 |
| This classifies the protein as unstable |
|
| Carbon |
4764 |
| Hydrogen |
7648 |
| Nitrogen |
1326 |
| Oxygen |
1524 |
| Sulfur |
32 |
| Total number of atoms |
15294 |
| Formula = C4764H7648N1326O1524S32 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
67770 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
67270 M-1 cm-1 |
| assuming all Cys residues are reduced |
67270 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
67770 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
