Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
85 |
4.9% |
| Arg[R] |
72 |
4.1% |
| Asn[N] |
90 |
5.1% |
| Asp[D] |
111 |
6.4% |
| Cys[C] |
20 |
1.1% |
| Gln[Q] |
59 |
3.4% |
| Glu[E] |
99 |
5.7% |
| Gly[G] |
95 |
5.4% |
| His[H] |
32 |
1.8% |
| Ile[I] |
132 |
7.6% |
| Leu[L] |
206 |
11.8% |
| Lys[K] |
108 |
6.2% |
| Met[M] |
36 |
2.1% |
| Phe[F] |
78 |
4.5% |
| Pro[P] |
72 |
4.1% |
| Ser[S] |
189 |
10.8% |
| Thr[T] |
95 |
5.4% |
| Trp[W] |
19 |
1.1% |
| Tyr[Y] |
60 |
3.4% |
| Val[V] |
90 |
5.1% |
| Total Length |
1748 |
|
| Instability index (II) |
42.75 |
| This classifies the protein as unstable |
|
| Carbon |
8787 |
| Hydrogen |
13854 |
| Nitrogen |
2304 |
| Oxygen |
2662 |
| Sulfur |
56 |
| Total number of atoms |
27663 |
| Formula = C8787H13854N2304O2662S56 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
195150 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
193900 M-1 cm-1 |
| assuming all Cys residues are reduced |
193900 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
195150 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
