Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
80 |
4.6% |
| Arg[R] |
76 |
4.3% |
| Asn[N] |
117 |
6.7% |
| Asp[D] |
103 |
5.9% |
| Cys[C] |
17 |
1.0% |
| Gln[Q] |
80 |
4.6% |
| Glu[E] |
88 |
5.0% |
| Gly[G] |
67 |
3.8% |
| His[H] |
66 |
3.8% |
| Ile[I] |
126 |
7.2% |
| Leu[L] |
148 |
8.4% |
| Lys[K] |
125 |
7.1% |
| Met[M] |
33 |
1.9% |
| Phe[F] |
51 |
2.9% |
| Pro[P] |
107 |
6.1% |
| Ser[S] |
179 |
10.2% |
| Thr[T] |
133 |
7.6% |
| Trp[W] |
14 |
0.8% |
| Tyr[Y] |
72 |
4.1% |
| Val[V] |
73 |
4.2% |
| Total Length |
1755 |
|
| Instability index (II) |
48.08 |
| This classifies the protein as unstable |
|
| Carbon |
8786 |
| Hydrogen |
13825 |
| Nitrogen |
2451 |
| Oxygen |
2719 |
| Sulfur |
50 |
| Total number of atoms |
27831 |
| Formula = C8786H13825N2451O2719S50 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
185280 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
184280 M-1 cm-1 |
| assuming all Cys residues are reduced |
184280 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
185280 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
