Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
32 |
3.6% |
| Arg[R] |
36 |
4.1% |
| Asn[N] |
68 |
7.7% |
| Asp[D] |
39 |
4.4% |
| Cys[C] |
18 |
2.0% |
| Gln[Q] |
37 |
4.2% |
| Glu[E] |
40 |
4.5% |
| Gly[G] |
23 |
2.6% |
| His[H] |
22 |
2.5% |
| Ile[I] |
83 |
9.4% |
| Leu[L] |
100 |
11.3% |
| Lys[K] |
75 |
8.5% |
| Met[M] |
14 |
1.6% |
| Phe[F] |
59 |
6.7% |
| Pro[P] |
32 |
3.6% |
| Ser[S] |
69 |
7.8% |
| Thr[T] |
49 |
5.5% |
| Trp[W] |
8 |
0.9% |
| Tyr[Y] |
32 |
3.6% |
| Val[V] |
48 |
5.4% |
| Total Length |
884 |
|
| Instability index (II) |
38.63 |
| This classifies the protein as stable |
|
| Carbon |
4685 |
| Hydrogen |
7368 |
| Nitrogen |
1224 |
| Oxygen |
1298 |
| Sulfur |
32 |
| Total number of atoms |
14607 |
| Formula = C4685H7368N1224O1298S32 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
92805 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
91680 M-1 cm-1 |
| assuming all Cys residues are reduced |
91680 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
92805 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
