Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
53 |
2.9% |
| Arg[R] |
81 |
4.5% |
| Asn[N] |
157 |
8.7% |
| Asp[D] |
124 |
6.9% |
| Cys[C] |
27 |
1.5% |
| Gln[Q] |
57 |
3.2% |
| Glu[E] |
131 |
7.3% |
| Gly[G] |
69 |
3.8% |
| His[H] |
48 |
2.7% |
| Ile[I] |
164 |
9.1% |
| Leu[L] |
140 |
7.8% |
| Lys[K] |
183 |
10.1% |
| Met[M] |
36 |
2.0% |
| Phe[F] |
50 |
2.8% |
| Pro[P] |
57 |
3.2% |
| Ser[S] |
136 |
7.5% |
| Thr[T] |
119 |
6.6% |
| Trp[W] |
9 |
0.5% |
| Tyr[Y] |
70 |
3.9% |
| Val[V] |
92 |
5.1% |
| Total Length |
1803 |
|
| Instability index (II) |
41.73 |
| This classifies the protein as unstable |
|
| Carbon |
7831 |
| Hydrogen |
12517 |
| Nitrogen |
2193 |
| Oxygen |
2441 |
| Sulfur |
54 |
| Total number of atoms |
25036 |
| Formula = C7831H12517N2193O2441S54 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
155425 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
153800 M-1 cm-1 |
| assuming all Cys residues are reduced |
144860 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
146235 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
