Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
45 |
6.2% |
| Arg[R] |
31 |
4.2% |
| Asn[N] |
28 |
3.8% |
| Asp[D] |
30 |
4.1% |
| Cys[C] |
15 |
2.1% |
| Gln[Q] |
21 |
2.9% |
| Glu[E] |
51 |
7.0% |
| Gly[G] |
48 |
6.6% |
| His[H] |
20 |
2.7% |
| Ile[I] |
42 |
5.7% |
| Leu[L] |
66 |
9.0% |
| Lys[K] |
41 |
5.6% |
| Met[M] |
15 |
2.1% |
| Phe[F] |
42 |
5.7% |
| Pro[P] |
41 |
5.6% |
| Ser[S] |
51 |
7.0% |
| Thr[T] |
43 |
5.9% |
| Trp[W] |
17 |
2.3% |
| Tyr[Y] |
40 |
5.5% |
| Val[V] |
44 |
6.0% |
| Total Length |
731 |
|
| Instability index (II) |
39.76 |
| This classifies the protein as stable |
|
| Carbon |
3818 |
| Hydrogen |
5763 |
| Nitrogen |
971 |
| Oxygen |
1077 |
| Sulfur |
30 |
| Total number of atoms |
11659 |
| Formula = C3818H5763N971O1077S30 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
153975 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
153100 M-1 cm-1 |
| assuming all Cys residues are reduced |
153100 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
153975 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
