Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
120 |
4.3% |
| Arg[R] |
109 |
3.9% |
| Asn[N] |
170 |
6.1% |
| Asp[D] |
149 |
5.3% |
| Cys[C] |
49 |
1.8% |
| Gln[Q] |
112 |
4.0% |
| Glu[E] |
179 |
6.4% |
| Gly[G] |
98 |
3.5% |
| His[H] |
47 |
1.7% |
| Ile[I] |
206 |
7.4% |
| Leu[L] |
357 |
12.8% |
| Lys[K] |
207 |
7.4% |
| Met[M] |
59 |
2.1% |
| Phe[F] |
157 |
5.6% |
| Pro[P] |
84 |
3.0% |
| Ser[S] |
251 |
9.0% |
| Thr[T] |
140 |
5.0% |
| Trp[W] |
41 |
1.5% |
| Tyr[Y] |
109 |
3.9% |
| Val[V] |
143 |
5.1% |
| Total Length |
2787 |
|
| Instability index (II) |
38.93 |
| This classifies the protein as stable |
|
| Carbon |
14578 |
| Hydrogen |
22814 |
| Nitrogen |
3738 |
| Oxygen |
4226 |
| Sulfur |
108 |
| Total number of atoms |
45464 |
| Formula = C14578H22814N3738O4226S108 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
390910 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
387910 M-1 cm-1 |
| assuming all Cys residues are reduced |
387910 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
390910 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
