Physico-chemical properties were determined using the
ProtParam tool available
through ExPASy to analyze the
primary protein sequence for atomic composition, extinction coefficient,
estimated half-life, instability index and aliphatic index. Transcript
translation calculations were determined using
CodonW.
| Ala[A] |
87 |
6.4% |
| Arg[R] |
58 |
4.3% |
| Asn[N] |
82 |
6.1% |
| Asp[D] |
85 |
6.3% |
| Cys[C] |
13 |
1.0% |
| Gln[Q] |
47 |
3.5% |
| Glu[E] |
89 |
6.6% |
| Gly[G] |
76 |
5.6% |
| His[H] |
27 |
2.0% |
| Ile[I] |
109 |
8.0% |
| Leu[L] |
126 |
9.3% |
| Lys[K] |
78 |
5.8% |
| Met[M] |
28 |
2.1% |
| Phe[F] |
79 |
5.8% |
| Pro[P] |
45 |
3.3% |
| Ser[S] |
97 |
7.2% |
| Thr[T] |
84 |
6.2% |
| Trp[W] |
18 |
1.3% |
| Tyr[Y] |
52 |
3.8% |
| Val[V] |
75 |
5.5% |
| Total Length |
1355 |
|
| Instability index (II) |
36.40 |
| This classifies the protein as stable |
|
| Carbon |
6932 |
| Hydrogen |
10726 |
| Nitrogen |
1808 |
| Oxygen |
2066 |
| Sulfur |
41 |
| Total number of atoms |
21573 |
| Formula = C6932H10726N1808O2066S41 |
|
| Escherichia coli (in vivo) |
>10 hours |
| mammalian reticulocytes (in vitro) |
30 hours |
| yeast (in vivo) |
>20 hours |
|
| assuming ALL Cys residues appear as half cystines |
178720 M-1 cm-1 |
| assuming NO Cys residues appear as half cystines |
177970 M-1 cm-1 |
| assuming all Cys residues are reduced |
176480 M-1 cm-1 |
| assuming all pairs of Cys residues form cystines |
177230 M-1 cm-1 |
|
|
| Codon Bias |
0.000 |
| Codon Adaptation Index |
0.000 |
| Frequency of Optimal Codons |
0.000 |
| Hydropathicity of Protein |
0.000 |
| Aromaticity Score |
0.000 |
|
