TFB5/YDR079C-A Protein Information 
| Standard Name | Tfb5p 1 |
|---|---|
| Systematic Name | Ydr079c-ap |
| ORF Classification | Verified |
| Description | Component of the RNA polymerase II general transcription and DNA repair factor TFIIH; involved in transcription initiation and in nucleotide-excision repair; homolog of Chlamydomonas reinhardtii REX1-S protein involved in DNA repair (2, 3, 4) |
| Click on image for expanded interactive view |
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| Post-translational Modifications | PhosphoGRID | PhosphoPep Database |
|---|---|
| Domains/motifs | See the graphical view and list of proteins that share domains/motifs in common with Tfb5p (InterPro) |
| Physical Interactions | There are 26 total physical interactions (BioGRID) |
| Homologs | PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer |
| External Sequence Databases |
EBI: UPI00001682E5 | Q3E7C1 MIPS: YDR079C-A NCBI: 197107384 | 197107450 | 197107452 | 398365465 | 85541644 | NP_076886.3 GenBank/EMBL/DDBJ: DAA11926.1 | Z74376 |
external links for Tfb5p
| Homologs | Interaction Resources | Protein databases/Other | Localization Resources |
|---|---|---|---|
| BLASTP (NCBI) | BioGRID | SCOP Superfamily | YPL+ |
| Ashbya (AGD) | BOND | GPMdb (Mass Spec.) | YeastGFP |
| Aspergillus (AspGD) | BioPIXIE | MIPS | YeastRC Public Image Repository |
| Candida (CGD) | CYC2008 (complexes) | Pfam domains | |
| Candida (CandidaDB) | Complexome | YeastRC Structure Prediction (Seattle) | |
| YGOB | DIP | ||
| YOGY | GeneMANIA |
References cited on this page View Complete Literature Guide for Tfb5p
| 1) | Ranish. J.A. et al. (2004) Quantitative proteomic identification of TFB5, a new component of general transcription/DNA repair factor IIH Nature Genetics |
| 2) | Ranish JA, et al. (2004) Identification of TFB5, a new component of general transcription and DNA repair factor IIH. Nat Genet 36(7):707-13 |
| 3) | Zhou Y, et al. (2007) Tfb5 interacts with Tfb2 and facilitates nucleotide excision repair in yeast. Nucleic Acids Res 35(3):861-71 |
| 4) | Ding B, et al. (2007) Tfb5 is partially dispensable for Rad26 mediated transcription coupled nucleotide excision repair in yeast. DNA Repair (Amst) 6(11):1661-9 |
