HUB1/YNR032C-A Protein Information Help

Standard Name Hub1p 1
Systematic Name Ynr032c-ap
ORF Classification Verified
Description Ubiquitin-like protein modifier; promotes alternative splicing of SRC1 pre-mRNA; binds non-covalently to the HIND domain of Snu66, may function in modification of Sph1p and Hbt1p, functionally complemented by the human or S. pombe ortholog; mechanism of Hub1p adduct formation not yet clear (1, 2, 3, 4)
Name Description Homologous to UBiquitin
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 73
Molecular Weight (Da) 8,272
Isoelectric Point (pI) 6.52

Click on image for expanded interactive view
pbrowse

Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Hub1p (InterPro)
Physical Interactions There are 15 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000168403 | Q6Q546
MIPS: YNR032C-A
NCBI: 27573859 | 334359249 | 334359250 | 334359253 | 45271008 | 6324360 | 83305829 | NP_014430.1 | NM_001184344.1
GenBank/EMBL/DDBJ: DAA10573.1 | AY558559 | Z71648
Amino Acid Sequence (or in FASTA format)
       1  MIEVVVNDRL GKKVRVKCLA EDSVGDFKKV LSLQIGTQPN KIVLQKGGSV
      51  LKDHISLEDY EVHDQTNLEL YYL*                            

external links for Hub1p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Candida (CGD) BioPIXIE MIPS
Candida (CandidaDB) CYC2008 (complexes) Pfam domains
YGOB Complexome YeastRC Structure Prediction (Seattle)
YOGY GeneMANIA


YeastRC Two-Hybrid (Seattle)

References cited on this page View Complete Literature Guide for Hub1p
1) Dittmar GA, et al.  (2002) Role of a ubiquitin-like modification in polarized morphogenesis. Science 295(5564):2442-6
2) McNally T, et al.  (2003) Structural analysis of UBL5, a novel ubiquitin-like modifier. Protein Sci 12(7):1562-6
3) Luders J, et al.  (2003) The ubiquitin-like protein HUB1 forms SDS-resistant complexes with cellular proteins in the absence of ATP. EMBO Rep 4(12):1169-74
4) Mishra SK, et al.  (2011) Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing. Nature ()