TAF3/YPL011C Protein Information

Standard Name	Taf3p 1
Systematic Name	Ypl011cp
Alias	Taf47p
ORF Classification	Verified
Description	TFIID subunit (47 kDa), involved in promoter binding and RNA polymerase II transcription initiation (1, 2)
Name Description	TATA binding protein-Associated Factor
Gene Product	TafII47

Experimental Data
Molecules/cell	3300 3

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	353
Molecular Weight (Da)	40,296
Isoelectric Point (pI)	4.5

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Taf3p (InterPro)
Signal Peptide(s)	There are 1 total predicted predicted signal peptide(s) (SignalP)
Physical Interactions	There are 105 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI000005312F \| Q12297 MIPS: YPL011C NCBI: 1314065 \| 42559734 \| 6325246 \| 683779 \| 965082 \| NP_015314.1 GenBank/EMBL/DDBJ: DAA11417.1 \| U33335 \| Z48483 \| Z71255

Amino Acid Sequence (or in FASTA format)
1 MTTNNDFYFA LLRISILQLL KAQGFDRARP SLVDVMTDLY AKFLSLLASE 51 VSSIAQARCD QDDTIALQDI TLALENLGIV KPTNVLDVYD ENSELSSSRG 101 MEKFKDWCIY STQLTDARIT ALPTVELLQS EEKESDPLSA IPDYLNQLLQ 151 NKGAKQKLET KNRKTELIED LINNNGLDDW IKLVIARQRI NMIERASKKE 201 SQNVPALPHI AGYKSSILSR HHHTTITNED RMPSAMTPRD EDALTEIQEN 251 PFVTSKLPIM RKENRLENIT LSFEDEELES LGEVEGPNQK SQENNNEESF 301 KENNKSLTES PHGDDRDISM FQFDSNVDTK WAEQEDMDST FQRRTSLDYG 351 GYF*

Amino Acid Sequence (or in FASTA format)

       1  MTTNNDFYFA LLRISILQLL KAQGFDRARP SLVDVMTDLY AKFLSLLASE
      51  VSSIAQARCD QDDTIALQDI TLALENLGIV KPTNVLDVYD ENSELSSSRG
     101  MEKFKDWCIY STQLTDARIT ALPTVELLQS EEKESDPLSA IPDYLNQLLQ
     151  NKGAKQKLET KNRKTELIED LINNNGLDDW IKLVIARQRI NMIERASKKE
     201  SQNVPALPHI AGYKSSILSR HHHTTITNED RMPSAMTPRD EDALTEIQEN
     251  PFVTSKLPIM RKENRLENIT LSFEDEELES LGEVEGPNQK SQENNNEESF
     301  KENNKSLTES PHGDDRDISM FQFDSNVDTK WAEQEDMDST FQRRTSLDYG
     351  GYF*

external links for Taf3p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	Organelle DB
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YPL+
YGOB	BioPIXIE	MIPS	YeastGFP
YOGY	CYC2008 (complexes)	Pfam domains	YeastRC Public Image Repository
	Complexome	YeastRC Structure Prediction (Seattle)
	DIP
	GeneMANIA

References cited on this page View Complete Literature Guide for Taf3p

1)	Tora L (2002) A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription. Genes Dev 16(6):673-5
2)	Lee TI and Young RA (2000) Transcription of eukaryotic protein-coding genes. Annu Rev Genet 34:77-137
3)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41