SIN3/YOL004W Protein Information Help

Standard Name Sin3p 1
Systematic Name Yol004wp
Alias Cpe1p 2 , Gam2p 3 , Rpd1p 4, 5 , Sdi1p 4, 6 , Sds16p 7, 8 , Ume4p 4, 9
ORF Classification Verified
Description Component of the Sin3p-Rpd3p histone deacetylase complex, involved in transcriptional repression and activation of diverse processes, including mating-type switching and meiosis; involved in the maintenance of chromosomal integrity (10, 11)
Name Description Switch INdependent
Experimental Data
Molecules/cell 1660 12
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 1,536
Molecular Weight (Da) 174,838
Isoelectric Point (pI) 5.42

Click on image for expanded interactive view
pbrowse

Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Sin3p (InterPro)
Physical Interactions There are 191 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000052F61 | P22579
MIPS: YOL004W
NCBI: 1419767 | 172094 | 2507475 | 6324570 | NP_014639.1
GenBank/EMBL/DDBJ: DAA10779.1 | M36822 | Z74746
Amino Acid Sequence (or in FASTA format)
       1  MSQVWHNSNS QSNDVATSND ATGSNERNEK EPSLQGNKPG FVQQQQRITL
      51  PSLSALSTKE EDRRDSNGQQ ALTSHAAHIL GYPPPHSNAM PSIATDSALK
     101  QPHEYHPRPK SSSSSPSINA SLMNAGPAPL PTVGAASFSL SRFDNPLPIK
     151  APVHTEEPKS YNGLQEEEKA TQRPQDCKEV PAGVQPADAP DPSSNHADAN
     201  DDNNNNENSH DEDADYRPLN VKDALSYLEQ VKFQFSSRPD IYNLFLDIMK
     251  DFKSQAIDTP GVIERVSTLF RGYPILIQGF NTFLPQGYRI ECSSNPDDPI
     301  RVTTPMGTTT VNNNISPSGR GTTDAQELGS FPESDGNGVQ QPSNVPMVPS
     351  SVYQSEQNQD QQQSLPLLAT SSGLPSIQQP EMPAHRQIPQ SQSLVPQEDA
     401  KKNVDVEFSQ AISYVNKIKT RFADQPDIYK HFLEILQTYQ REQKPINEVY
     451  AQVTHLFQNA PDLLEDFKKF LPDSSASANQ QVQHAQQHAQ QQHEAQMHAQ
     501  AQAQAQAQAQ VEQQKQQQQF LYPASGYYGH PSNRGIPQQN LPPIGSFSPP
     551  TNGSTVHEAY QDQQHMQPPH FMPLPSIVQH GPNMVHQGIA NENPPLSDLR
     601  TSLTEQYAPS SIQHQQQHPQ SISPIANTQY GDIPVRPEID LDPSIVPVVP
     651  EPTEPIENNI SLNEEVTFFE KAKRYIGNKH LYTEFLKILN LYSQDILDLD
     701  DLVEKVDFYL GSNKELFTWF KNFVGYQEKT KCIENIVHEK HRLDLDLCEA
     751  FGPSYKRLPK SDTFMPCSGR DDMCWEVLND EWVGHPVWAS EDSGFIAHRK
     801  NQYEETLFKI EEERHEYDFY IESNLRTIQC LETIVNKIEN MTENEKANFK
     851  LPPGLGHTSM TIYKKVIRKV YDKERGFEII DALHEHPAVT APVVLKRLKQ
     901  KDEEWRRAQR EWNKVWRELE QKVFFKSLDH LGLTFKQADK KLLTTKQLIS
     951  EISSIKVDQT NKKIHWLTPK PKSQLDFDFP DKNIFYDILC LADTFITHTT
    1001  AYSNPDKERL KDLLKYFISL FFSISFEKIE ESLYSHKQNV SESSGSDDGS
    1051  SIASRKRPYQ QEMSLLDILH RSRYQKLKRS NDEDGKVPQL SEPPEEEPNT
    1101  IEEEELIDEE AKNPWLTGNL VEEANSQGII QNRSIFNLFA NTNIYIFFRH
    1151  WTTIYERLLE IKQMNERVTK EINTRSTVTF AKDLDLLSSQ LSEMGLDFVG
    1201  EDAYKQVLRL SRRLINGDLE HQWFEESLRQ AYNNKAFKLY TIDKVTQSLV
    1251  KHAHTLMTDA KTAEIMALFV KDRNASTTSA KDQIIYRLQV RSHMSNTENM
    1301  FRIEFDKRTL HVSIQYIALD DLTLKEPKAD EDKWKYYVTS YALPHPTEGI
    1351  PHEKLKIPFL ERLIEFGQDI DGTEVDEEFS PEGISVSTLK IKIQPITYQL
    1401  HIENGSYDVF TRKATNKYPT IANDNTQKGM VSQKKELISK FLDCAVGLRN
    1451  NLDEAQKLSM QKKWENLKDS IAKTSAGNQG IESETEKGKI TKQEQSDNLD
    1501  SSTASVLPAS ITTVPQDDNI ETTGNTESSD KGAKIQ*              

external links for Sin3p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB DIP

YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Sin3p
1) Sternberg PW, et al.  (1987) Activation of the yeast HO gene by release from multiple negative controls. Cell 48(4):567-77
2) Hudak KA, et al.  (1994) A pleiotropic phospholipid biosynthetic regulatory mutation in Saccharomyces cerevisiae is allelic to sin3 (sdi1, ume4, rpd1). Genetics 136(2):475-83
3) Yoshimoto H, et al.  (1992) The Saccharomyces cerevisiae GAM2/SIN3 protein plays a role in both activation and repression of transcription. Mol Gen Genet 233(1-2):327-30
4) Vidal M, et al.  (1991) RPD1 (SIN3/UME4) is required for maximal activation and repression of diverse yeast genes. Mol Cell Biol 11(12):6306-16
5) Vidal M, et al.  (1990) Direct selection for mutants with increased K+ transport in Saccharomyces cerevisiae. Genetics 125(2):313-20
6) Nasmyth K, et al.  (1987) Both positive and negative regulators of HO transcription are required for mother-cell-specific mating-type switching in yeast. Cell 48(4):579-87
7) Vannier D, et al.  (1996) Evidence that the transcriptional regulators SIN3 and RPD3, and a novel gene (SDS3) with similar functions, are involved in transcriptional silencing in S. cerevisiae. Genetics 144(4):1343-53
8) Sussel L, et al.  (1995) Suppressors of defective silencing in yeast: effects on transcriptional repression at the HMR locus, cell growth and telomere structure. Genetics 141(3):873-88
9) Strich R, et al.  (1989) Identification of negative regulatory genes that govern the expression of early meiotic genes in yeast. Proc Natl Acad Sci U S A 86(24):10018-22
10) Bernstein BE, et al.  (2000) Genomewide studies of histone deacetylase function in yeast. Proc Natl Acad Sci U S A 97(25):13708-13
11) Silverstein RA and Ekwall K  (2005) Sin3: a flexible regulator of global gene expression and genome stability. Curr Genet 47(1):1-17
12) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41