YMR221C Protein Information Help

Systematic Name Ymr221cp
ORF Classification Uncharacterized
Description Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy (1, 2)
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 504
Molecular Weight (Da) 56,177
Isoelectric Point (pI) 7.04

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Ymr221cp (InterPro)
Transmembrane Domains There are 11 total predicted transmembrane domains (TMHMM)
Signal Peptide(s) There are 1 total predicted predicted signal peptide(s) (SignalP)
Physical Interactions There are 9 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000013B918 | Q04991
MIPS: YMR221C
NCBI: 2497193 | 6323877 | 887602 | NP_013948.1
GenBank/EMBL/DDBJ: DAA10120.1 | Z49939
Amino Acid Sequence (or in FASTA format)
 
       1  MTSTRTLRYA QVACACIWCL FSAGIIFGFA ALKPILISEG VYHELCDPKD
      51  GDRLLCTAQD LKLNFIFALS ATVTNIMALP VGKILDMYGP RVCGIIGSCL
     101  LFLASGNFIS AKHLVSLWDP YLVGYTLLAV AGPFVFISCF QLANSFPQRS
     151  GTVLALLTGS FDSSSALFLL YRLLYQNWFP TLNVSRFFTL YLIVPVFILA
     201  CQLTIMPHSS YKTVNHIAKI AVEGLDENGR LIEGDTGSGI IPDEQERQSL
     251  IAIEREEDSI PSRPQRRKSV LETYVEDKLQ KKSGGIFGVL HGKSAYEQIK
     301  SPWFYLMLLF ALVAMLRINY FIATVRTQEE YLLNDPDLAL KLNSIFDMLL
     351  PLGGAVSIPF IGLLLDHTDT LSTLTILFTT STAIGVFGLI PNSFTWNLIG
     401  IVLLVVYRPF YYTVVSDYSS KVFGFDTFGT VYGLLSCICG IFNMSQNLLD
     451  KWTHTTFNMN PFPINLTLVI LTVVFSLTLT FYIRSQILPK PVNERGLSSN
     501  YQTI*

external links for Ymr221cp
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Aspergillus (AspGD) BioPIXIE MIPS YeastRC Public Image Repository
Candida (CGD) CYC2008 (complexes) Pfam domains
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB DIP

YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Ymr221cp
1) Reinders J, et al.  (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54
2) Tarassov K, et al.  (2008) An in vivo map of the yeast protein interactome. Science 320(5882):1465-70
3) Meisinger, C., et al.  (2004) personal communication