RRB1/YMR131C Protein Information Help

Standard Name Rrb1p 1
Systematic Name Ymr131cp
ORF Classification Verified
Description Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p (1, 2)
Name Description Regulator of Ribosome Biogenesis 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 511
Molecular Weight (Da) 57,261
Isoelectric Point (pI) 4.31

Click on image for expanded interactive view
pbrowse

Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rrb1p (InterPro)
Physical Interactions There are 24 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000134A13 | Q04225
MIPS: YMR131C
NCBI: 2494913 | 6323779 | 728670 | NP_013850.1
GenBank/EMBL/DDBJ: DAA10028.1 | Z48622
Amino Acid Sequence (or in FASTA format)
 
       1  MSKRSIEVNE EQDRVVSAKT ESHSVPAIPA SEEQDAPKND LEEQLSDEFD
      51  SDGEIIEIDG DDEINDEDDL RKKQEEAETL VQKDQSEGNK EKIQELYLPH
     101  MSRPLGPDEV LEADPTVYEM LHNVNMPWPC LTLDVIPDTL GSERRNYPQS
     151  ILLTTATQSS RKKENELMVL ALSNLAKTLL KDDNEGEDDE EDDEDDVDPV
     201  IENENIPLRD TTNRLKVSPF AISNQEVLTA TMSENGDVYI YNLAPQSKAF
     251  STPGYQIPKS AKRPIHTVKN HGNVEGYGLD WSPLIKTGAL LSGDCSGQIY
     301  FTQRHTSRWV TDKQPFTVSN NKSIEDIQWS RTESTVFATA GCDGYIRIWD
     351  TRSKKHKPAI SVKASNTDVN VISWSDKIGY LLASGDDNGT WGVWDLRQFT
     401  PSNADAVQPV AQYDFHKGAI TSIAFNPLDE SIVAVGSEDN TVTLWDLSVE
     451  ADDEEIKQQA AETKELQEIP PQLLFVHWQK EVKDVKWHKQ IPGCLVSTGT
     501  DGLNVWKTIS V*

external links for Rrb1p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB DIP

YOGY GeneMANIA


YeastRC Two-Hybrid (Seattle)

References cited on this page View Complete Literature Guide for Rrb1p
1) Iouk TL, et al.  (2001) Rrb1p, a yeast nuclear WD-repeat protein involved in the regulation of ribosome biosynthesis. Mol Cell Biol 21(4):1260-71
2) Schaper S, et al.  (2001) A yeast homolog of chromatin assembly factor 1 is involved in early ribosome assembly. Curr Biol 11(23):1885-90