YML096W Protein Information Help

Systematic Name Yml096wp
ORF Classification Uncharacterized
Description Putative protein of unknown function with similarity to asparagine synthetases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YML096W is not an essential gene and partially overlaps the verified gene RAD10 (1, 2, 3)
Experimental Data
Molecules/cell 3750 4
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 525
Molecular Weight (Da) 59,469
Isoelectric Point (pI) 6.44

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Yml096wp (InterPro)
Physical Interactions There are 15 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000013B9DE | Q04489
MIPS: YML096W
NCBI: 2494766 | 575706 | 6323542 | NP_013613.1 | NM_001182456.1
GenBank/EMBL/DDBJ: DAA09803.1 | Z46660
Amino Acid Sequence (or in FASTA format)
 
       1  MCGILLHYCP NNNYLNDELI EFPEGTEFGD TTCTNESSIF NKIIPYIAAR
      51  GPNYSSLRAV KAYRISWFSS VLSLRQPFTK QSINVDDRYF LQFNGELYNK
     101  EISQGDNDSL YIASMLQNLK EGMGVIDVIK SLEGEYAYTI YDVNSSKLYF
     151  GRDPIGRRSL SYSVTPDNEL YVASVTGSAG SFQDCIGGVI YEYDTRTKLL
     201  NSNQRSHLPY EVTSEIDLNF TSLSEVSKNL YAVLRDSVKK RVESIHPRHI
     251  ENSPIAVLFS GGIDCSVIVA LICEVLQEND YKCGKPVIEL LNVSFENPRT
     301  GLFPSDTPDR KLSINSAKTL QNLYPNVDIK LVEVDVPYDE YLKWKPFVIN
     351  LMYPKQTEMD LSIAIAFFFA SRGRGFLTSL NGERTPYQRH GIVLFSGLGA
     401  DELYGGYHKF ANKPPHELVE ELTRQINNIY DRNLNRDDKV IAHNGVEVRY
     451  PFLDEYVIKL STAEIPINFK VNKLILRKVA SQYLKLDGIS SEPKRAIQFG
     501  AKSAKMTKDG NKHGTDLLKE NRNCS*

external links for Yml096wp
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Candida (CGD) BioPIXIE MIPS YeastRC Public Image Repository
Candida (CandidaDB) CYC2008 (complexes) Pfam domains
YGOB Complexome YeastRC Structure Prediction (Seattle)
YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Yml096wp
1) Giaever G, et al.  (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91
2) Huh WK, et al.  (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91
3) Balakrishnan R, et al.  (2005) Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD). Nucleic Acids Res 33 Database Issue:D374-7
4) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41