RPS17A/YML024W Protein Information Help

Standard Name Rps17ap
Systematic Name Yml024wp
Alias Rp51ap 1 , Rpl51ap
ORF Classification Verified
Description Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17A has a paralog, RPS17B, that arose from the whole genome duplication (2, 3, 4, 5)
Name Description Ribosomal Protein of the Small subunit
Gene Product S17A 1 , S17e 5 , rp51A 1
Experimental Data
Molecules/cell 30900 6
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 136
Molecular Weight (Da) 15,788
Isoelectric Point (pI) 11.28

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rps17ap (InterPro)
Physical Interactions There are 53 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000132F1E | P02407
MIPS: YML024W
NCBI: 133962 | 172458 | 313103679 | 315113458 | 315113486 | 364506113 | 364506151 | 575695 | 6323617 | NP_013688.1 | NM_001182382.1
GenBank/EMBL/DDBJ: DAA09874.1 | J01349 | Z46659
Amino Acid Sequence (or in FASTA format)
 
       1  MGRVRTKTVK RASKALIERY YPKLTLDFQT NKRLCDEIAT IQSKRLRNKI
      51  AGYTTHLMKR IQKGPVRGIS FKLQEEERER KDQYVPEVSA LDLSRSNGVL
     101  NVDNQTSDLV KSLGLKLPLS VINVSAQRDR RYRKRV*

external links for Rps17ap
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Aspergillus (AspGD) BioPIXIE MIPS
YGOB CYC2008 (complexes) Pfam domains
YOGY Complexome YeastRC Structure Prediction (Seattle)

GeneMANIA

References cited on this page View Complete Literature Guide for Rps17ap
1) Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7
2) Abovich N, et al.  (1985) Effect of RP51 gene dosage alterations on ribosome synthesis in Saccharomyces cerevisiae. Mol Cell Biol 5(12):3429-35
3) Lecompte O, et al.  (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
4) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
5) Jenner L, et al.  (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67
6) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41