VPS65/YLR322W Protein Information Help

Standard Name Vps65p
Systematic Name Ylr322wp
ORF Classification Dubious
Description Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 75% of ORF overlaps the verified gene SFH1; deletion causes a vacuolar protein sorting defect and blocks anaerobic growth (1, 2, 3)
Name Description Vacuolar Protein Sorting 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 104
Molecular Weight (Da) 12,162
Isoelectric Point (pI) 8.25

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Post-translational Modifications PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Vps65p (InterPro)
Transmembrane Domains There are 1 total predicted transmembrane domains (TMHMM)
Signal Peptide(s) There are 1 total predicted predicted signal peptide(s) (SignalP)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000036C79 | O13554
MIPS: YLR322W
NCBI: 2258169 | 74644727
GenBank/EMBL/DDBJ: U20618
Amino Acid Sequence (or in FASTA format)
 
       1  MRHCIIFIVC ISIVEIRTVH IEFIKEIVVI FRIVDHFSPF MLPCLLSHCK
      51  DGDTIIFVCQ SVMKVRNISL WNKLVLVRHC VLLCAFLLSF FNVLHSIISI
     101  CRIF*

external links for Vps65p
Homologs Interaction Resources Protein databases/Other Localization Resources
Ashbya (AGD) BOND SCOP Superfamily YPL+
YGOB BioPIXIE GPMdb (Mass Spec.) YeastGFP
YOGY CYC2008 (complexes) MIPS

Complexome Pfam domains

DIP


GeneMANIA

References cited on this page View Complete Literature Guide for Vps65p
1) Bonangelino CJ, et al.  (2002) Genomic screen for vacuolar protein sorting genes in Saccharomyces cerevisiae. Mol Biol Cell 13(7):2486-501
2) Snoek IS and Steensma HY  (2006) Why does Kluyveromyces lactis not grow under anaerobic conditions? Comparison of essential anaerobic genes of Saccharomyces cerevisiae with the Kluyveromyces lactis genome. FEMS Yeast Res 6(3):393-403
3) Fisk DG, et al.  (2006) Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Yeast 23(12):857-65