RPS30A/YLR287C-A Protein Information Help

Standard Name Rps30ap 1
Systematic Name Ylr287c-ap
ORF Classification Verified
Description Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30A has a paralog, RPS30B, that arose from the whole genome duplication (1, 2, 3, 4, 5)
Name Description Ribosomal Protein of the Small subunit 1
Gene Product S30A 2 , S30e 5
Experimental Data
Molecules/cell 37600 6
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 63
Molecular Weight (Da) 7,118
Isoelectric Point (pI) 12.24

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rps30ap (InterPro)
Physical Interactions There are 55 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI00001683A6 | P0CX33
MIPS: YLR287C-A
NCBI: 1256751 | 1256753 | 1381038 | 313103688 | 338819349 | 377656239 | 398365605 | 6323318 | NP_013390.1 | NP_014825.3 | NP_014827.3
GenBank/EMBL/DDBJ: DAA09599.1 | U17243 | U48699 | U48700
Amino Acid Sequence (or in FASTA format)
 
       1  MAKVHGSLAR AGKVKSQTPK VEKTEKPKKP KGRAYKRLLY TRRFVNVTLV
      51  NGKRRMNPGP SVQ*

external links for Rps30ap
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome

YGOB GeneMANIA

YOGY


References cited on this page View Complete Literature Guide for Rps30ap
1) Baker RT, et al.  (1996) The yeast homolog of mammalian ribosomal protein S30 is expressed from a duplicated gene without a ubiquitin-like protein fusion sequence. Evolutionary implications. J Biol Chem 271(23):13549-55
2) Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7
3) Lecompte O, et al.  (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
4) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
5) Jenner L, et al.  (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67
6) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41