UTP13/YLR222C Protein Information Help

Standard Name Utp13p 1
Systematic Name Ylr222cp
ORF Classification Verified
Description Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA (1)
Name Description U Three Protein 1
Experimental Data
Molecules/cell 8070 2
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 817
Molecular Weight (Da) 91,031
Isoelectric Point (pI) 5.15

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Utp13p (InterPro)
Physical Interactions There are 111 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000053030 | Q05946
MIPS: YLR222C
NCBI: 609371 | 62906651 | 6323251 | NP_013323.1
GenBank/EMBL/DDBJ: DAA09538.1 | U19027
Amino Acid Sequence (or in FASTA format)
 
       1  MDLKTSYKGI SLNPIYAGSS AVATVSENGK ILATPVLDEI NIIDLTPGSR
      51  KILHKISNED EQEITALKLT PDGQYLTYVS QAQLLKIFHL KTGKVVRSMK
     101  ISSPSYILDA DSTSTLLAVG GTDGSIIVVD IENGYITHSF KGHGGTISSL
     151  KFYGQLNSKI WLLASGDTNG MVKVWDLVKR KCLHTLQEHT SAVRGLDIIE
     201  VPDNDEPSLN LLSGGRDDII NLWDFNMKKK CKLLKTLPVN QQVESCGFLK
     251  DGDGKRIIYT AGGDAIFQLI DSESGSVLKR TNKPIEELFI IGVLPILSNS
     301  QMFLVLSDQT LQLINVEEDL KNDEDTIQVT SSIAGNHGII ADMRYVGPEL
     351  NKLALATNSP SLRIIPVPDL SGPEASLPLD VEIYEGHEDL LNSLDATEDG
     401  LWIATASKDN TAIVWRYNEN SCKFDIYAKY IGHSAAVTAV GLPNIVSKGY
     451  PEFLLTASND LTIKKWIIPK PTASMDVQII KVSEYTRHAH EKDINALSVS
     501  PNDSIFATAS YDKTCKIWNL ENGELEATLA NHKRGLWDVS FCQYDKLLAT
     551  SSGDKTVKIW SLDTFSVMKT LEGHTNAVQR CSFINKQKQL ISCGADGLIK
     601  IWDCSSGECL KTLDGHNNRL WALSTMNDGD MIVSADADGV FQFWKDCTEQ
     651  EIEEEQEKAK LQVEQEQSLQ NYMSKGDWTN AFLLAMTLDH PMRLFNVLKR
     701  ALGESRSRQD TEEGKIEVIF NEELDQAISI LNDEQLILLM KRCRDWNTNA
     751  KTHTIAQRTI RCILMHHNIA KLSEIPGMVK IVDAIIPYTQ RHFTRVDNLV
     801  EQSYILDYAL VEMDKLF*

external links for Utp13p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Candida (CGD) BioPIXIE MIPS YeastRC Public Image Repository
Candida (CandidaDB) CYC2008 (complexes) Pfam domains
YGOB Complexome YeastRC Structure Prediction (Seattle)
YOGY DIP


GeneMANIA

References cited on this page View Complete Literature Guide for Utp13p
1) Dragon F, et al.  (2002) A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417(6892):967-70
2) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41