GSM1/YJL103C Protein Information

Standard Name	Gsm1p 1
Systematic Name	Yjl103cp
ORF Classification	Verified
Description	Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis (1, 2, 3, 4)
Name Description	Glucose Starvation Modulator 1

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	618
Molecular Weight (Da)	70,381
Isoelectric Point (pI)	7.85

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Gsm1p (InterPro)
Physical Interactions	There are 4 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI000013B5DF \| P42950 MIPS: YJL103C NCBI: 1009448 \| 1176484 \| 51830406 \| 6322358 \| 728707 \| NP_012432.1 \| NM_001181536.1 GenBank/EMBL/DDBJ: DAA08697.1 \| AY723834 \| X85021 \| Z49378

Amino Acid Sequence (or in FASTA format)
1 MTKKLPSELK QTRKSIQTAC EFCHTKHIQC DVGRPCQNCL KRNIGKFCRD 51 KKRKSRKRIE KHGTQPYLNL GKRLVIHDVP SKTVSPSSVH LQRDFLSSDQ 101 EKPGKTPAHN TNIQYTYNIN DNFQSAGSIP RITNFNTNNR QTVLENTSNN 151 ISASQAVHLM NDPIIPTVRK STLNLKSHFL EQHKAMQQPL ATNCLVATSN 201 VPVHSGMDDS NKSDDDVDDE TNIHFDSMWC NDEYMKLKDI VDISTPFLPN 251 NSQIFSLQES EYPNPSASTR GNSSLHLTNL LNSTKSVNDQ KDSSIGHSTS 301 TFNTYDEVVS RPFISLDMLH LNRGANANTH PSHNAKLESE CDSSSHSDAD 351 LEKHDTDFIS PSKFRELVKT PQDLYDNKCL IKPHNYKLAY TKLLTTLRKK 401 FLEGAEIDKS ASVKDEHSTQ KHNLRYDLEV IIRSILERYA PIFISLTSNM 451 IEEDLLLQEV TLQRALLDLE NMAKLVSCTP MCIWRRSGEI CFVSNEFYSL 501 TGFNKNLLLD RTSFIFEYLD HKSVSNYFQI FNELLAFGYN DINKRKKLLM 551 LNACSSTSSK ITEGFSFTTD GKAIFTKCNL LLSNGLYLKC ACCWTVKRDS 601 FNIPILVMGQ FLPIFEMD*

Amino Acid Sequence (or in FASTA format)

       1  MTKKLPSELK QTRKSIQTAC EFCHTKHIQC DVGRPCQNCL KRNIGKFCRD
      51  KKRKSRKRIE KHGTQPYLNL GKRLVIHDVP SKTVSPSSVH LQRDFLSSDQ
     101  EKPGKTPAHN TNIQYTYNIN DNFQSAGSIP RITNFNTNNR QTVLENTSNN
     151  ISASQAVHLM NDPIIPTVRK STLNLKSHFL EQHKAMQQPL ATNCLVATSN
     201  VPVHSGMDDS NKSDDDVDDE TNIHFDSMWC NDEYMKLKDI VDISTPFLPN
     251  NSQIFSLQES EYPNPSASTR GNSSLHLTNL LNSTKSVNDQ KDSSIGHSTS
     301  TFNTYDEVVS RPFISLDMLH LNRGANANTH PSHNAKLESE CDSSSHSDAD
     351  LEKHDTDFIS PSKFRELVKT PQDLYDNKCL IKPHNYKLAY TKLLTTLRKK
     401  FLEGAEIDKS ASVKDEHSTQ KHNLRYDLEV IIRSILERYA PIFISLTSNM
     451  IEEDLLLQEV TLQRALLDLE NMAKLVSCTP MCIWRRSGEI CFVSNEFYSL
     501  TGFNKNLLLD RTSFIFEYLD HKSVSNYFQI FNELLAFGYN DINKRKKLLM
     551  LNACSSTSSK ITEGFSFTTD GKAIFTKCNL LLSNGLYLKC ACCWTVKRDS
     601  FNIPILVMGQ FLPIFEMD*

external links for Gsm1p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	Organelle DB
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YPL+
YGOB	BioPIXIE	MIPS	YeastGFP
YOGY	CYC2008 (complexes)	Pfam domains
	Complexome	YeastRC Structure Prediction (Seattle)
	GeneMANIA
	YeastRC Two-Hybrid (Seattle)

References cited on this page View Complete Literature Guide for Gsm1p

1)	van Bakel H, et al. (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21
2)	Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405
3)	Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7
4)	Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5