UTP18/YJL069C Protein Information

Standard Name	Utp18p 1
Systematic Name	Yjl069cp
ORF Classification	Verified
Description	Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis of large-scale protein-protein interaction data (1)
Name Description	U Three Protein 1

Experimental Data
Molecules/cell	9570 2

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	594
Molecular Weight (Da)	66,423
Isoelectric Point (pI)	4.7

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Utp18p (InterPro)
Physical Interactions	There are 103 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI0000053013 \| P40362 MIPS: YJL069C NCBI: 1008221 \| 498997 \| 51012571 \| 6322392 \| 731935 \| 895894 \| NP_012466.1 GenBank/EMBL/DDBJ: DAA08730.1 \| AY692560 \| X88851 \| Z34288 \| Z49344

Amino Acid Sequence (or in FASTA format)
1 MTMATTAMNV SVPPPDEEEQ LLAKFVFGDT TDLQENLAKF NADFIFNEQE 51 MDVEDQEDEG SESDNSEEDE AQNGELDHVN NDQLFFVDDG GNEDSQDKNE 101 DTMDVDDEDD SSSDDYSEDS EEAAWIDSDD EKIKVPILVT NKTKKLRTSY 151 NESKINGVHY INRLRSQFEK IYPRPKWVDD ESDSELDDEE DDEEEGSNNV 201 INGDINALTK ILSTTYNYKD TLSNSKLLPP KKLDIVRLKD ANASHPSHSA 251 IQSLSFHPSK PLLLTGGYDK TLRIYHIDGK TNHLVTSLHL VGSPIQTCTF 301 YTSLSNQNQQ NIFTAGRRRY MHSWDLSLEN LTHSQTAKIE KFSRLYGHES 351 TQRSFENFKV AHLQNSQTNS VHGIVLLQGN NGWINILHST SGLWLMGCKI 401 EGVITDFCID YQPISRGKFR TILIAVNAYG EVWEFDLNKN GHVIRRWKDQ 451 GGVGITKIQV GGGTTTTCPA LQISKIKQNR WLAVGSESGF VNLYDRNNAM 501 TSSTPTPVAA LDQLTTTISN LQFSPDGQIL CMASRAVKDA LRLVHLPSCS 551 VFSNWPTSGT PLGKVTSVAF SPSGGLLAVG NEQGKVRLWK LNHY*

Amino Acid Sequence (or in FASTA format)

       1  MTMATTAMNV SVPPPDEEEQ LLAKFVFGDT TDLQENLAKF NADFIFNEQE
      51  MDVEDQEDEG SESDNSEEDE AQNGELDHVN NDQLFFVDDG GNEDSQDKNE
     101  DTMDVDDEDD SSSDDYSEDS EEAAWIDSDD EKIKVPILVT NKTKKLRTSY
     151  NESKINGVHY INRLRSQFEK IYPRPKWVDD ESDSELDDEE DDEEEGSNNV
     201  INGDINALTK ILSTTYNYKD TLSNSKLLPP KKLDIVRLKD ANASHPSHSA
     251  IQSLSFHPSK PLLLTGGYDK TLRIYHIDGK TNHLVTSLHL VGSPIQTCTF
     301  YTSLSNQNQQ NIFTAGRRRY MHSWDLSLEN LTHSQTAKIE KFSRLYGHES
     351  TQRSFENFKV AHLQNSQTNS VHGIVLLQGN NGWINILHST SGLWLMGCKI
     401  EGVITDFCID YQPISRGKFR TILIAVNAYG EVWEFDLNKN GHVIRRWKDQ
     451  GGVGITKIQV GGGTTTTCPA LQISKIKQNR WLAVGSESGF VNLYDRNNAM
     501  TSSTPTPVAA LDQLTTTISN LQFSPDGQIL CMASRAVKDA LRLVHLPSCS
     551  VFSNWPTSGT PLGKVTSVAF SPSGGLLAVG NEQGKVRLWK LNHY*

external links for Utp18p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	Organelle DB
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YPL+
Candida (CGD)	BioPIXIE	MIPS	YeastGFP
Candida (CandidaDB)	CYC2008 (complexes)	Pfam domains	YeastRC Public Image Repository
YGOB	Complexome	YeastRC Structure Prediction (Seattle)
YOGY	DIP
	GeneMANIA

References cited on this page View Complete Literature Guide for Utp18p

1)	Samanta MP and Liang S (2003) Predicting protein functions from redundancies in large-scale protein interaction networks. Proc Natl Acad Sci U S A 100(22):12579-83
2)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41