RPL26B/YGR034W Protein Information Help

Standard Name Rpl26bp
Systematic Name Ygr034wp
ORF Classification Verified
Description Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication (1, 2, 3, 4, 5)
Name Description Ribosomal Protein of the Large subunit
Gene Product L24 5 , L26B 2 , L33B 2 , YL33 2
Experimental Data
Molecules/cell 33200 6
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 127
Molecular Weight (Da) 14,235
Isoelectric Point (pI) 11.25

Click on image for expanded interactive view
pbrowse

Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rpl26bp (InterPro)
Physical Interactions There are 89 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000E445E9 | P53221
MIPS: YGR034W
NCBI: 115361653 | 116006491 | 1360155 | 1710575 | 71064021 | NP_011548.2 | NM_001181163.1
GenBank/EMBL/DDBJ: DAA08131.1 | DQ115390 | DQ881451 | Z72819
Amino Acid Sequence (or in FASTA format)
 
       1  MAKQSLDVSS DRRKARKAYF TAPSSERRVL LSAPLSKELR AQYGIKALPI
      51  RRDDEVLVVR GSKKGQEGKI SSVYRLKFAV QVDKVTKEKV NGASVPINLH
     101  PSKLVITKLH LDKDRKALIQ RKGGKLE*

external links for Rpl26bp
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Candida (CGD) BioPIXIE MIPS YeastGFP
Candida (CandidaDB) CYC2008 (complexes) Pfam domains
YGOB Complexome

YOGY DIP


GeneMANIA

References cited on this page View Complete Literature Guide for Rpl26bp
1) Lee JC, et al.  (1983) Binding of proteins from the large ribosomal subunits to 5.8 S rRNA of Saccharomyces cerevisiae. J Biol Chem 258(2):854-8
2) Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7
3) Lecompte O, et al.  (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
4) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
5) Jenner L, et al.  (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67
6) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41