RSM23/YGL129C Protein Information

Standard Name	Rsm23p 1
Systematic Name	Ygl129cp
ORF Classification	Verified
Description	Mitochondrial ribosomal protein of the small subunit, has similarity to mammalian apoptosis mediator proteins; null mutation prevents induction of apoptosis by overproduction of metacaspase Mca1p (1, 2)
Name Description	Ribosomal Small subunit of Mitochondria 1

Experimental Data
Molecules/cell	1300 3

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	450
Molecular Weight (Da)	50,867
Isoelectric Point (pI)	10.32

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Rsm23p (InterPro)
Physical Interactions	There are 56 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI0000168B65 \| Q01163 MIPS: YGL129C NCBI: 1246908 \| 1322695 \| 1723915 \| 218413 \| 330443549 \| 347595784 \| NP_011386.2 GenBank/EMBL/DDBJ: DAA07980.2 \| D10263 \| X87252 \| Z72651

Amino Acid Sequence (or in FASTA format)
1 MLRMSTSRFI GQRLFTTARS LQAAKPAPKG KTQGFSKKSS SVSSYSSAKR 51 VTPGSLYKNW TNTTHTAQLQ QTAVPLALPI FNFDDISKTL NKVVSYSNKQ 101 YKSLHHLGSF KKSQFNELFQ KPVCLVREDA TNSFLKKLVS HPVKKFIITG 151 EPGVGKTVLL SQAHAYAVDS KQIIINISYP ELFLNGRNDF SYDDDLKLFI 201 QPMYLKKLIR KILKANDPAL LKSIELSKDY KFSNANPKNA SVKPFVTLNK 251 TKNTVLDLLS VMTHPHNRGK LMKAIIDELS VQSKVPIMFT VDNFSKVLTT 301 AYSAYRNTEN KQIYSLDLQM GKLMMDIISG ETKFANGESS TILAISGVDR 351 TNKTLPVALG KIPVDPYVTR YHYEPKFVEL LQKGNVTEFE VPKLNKQEVN 401 ELIDYYKQSN VLLDKDITGK KWENLIDEKY FLSGNGNPRE LLKSLVLSHR 451 *

Amino Acid Sequence (or in FASTA format)

       1  MLRMSTSRFI GQRLFTTARS LQAAKPAPKG KTQGFSKKSS SVSSYSSAKR
      51  VTPGSLYKNW TNTTHTAQLQ QTAVPLALPI FNFDDISKTL NKVVSYSNKQ
     101  YKSLHHLGSF KKSQFNELFQ KPVCLVREDA TNSFLKKLVS HPVKKFIITG
     151  EPGVGKTVLL SQAHAYAVDS KQIIINISYP ELFLNGRNDF SYDDDLKLFI
     201  QPMYLKKLIR KILKANDPAL LKSIELSKDY KFSNANPKNA SVKPFVTLNK
     251  TKNTVLDLLS VMTHPHNRGK LMKAIIDELS VQSKVPIMFT VDNFSKVLTT
     301  AYSAYRNTEN KQIYSLDLQM GKLMMDIISG ETKFANGESS TILAISGVDR
     351  TNKTLPVALG KIPVDPYVTR YHYEPKFVEL LQKGNVTEFE VPKLNKQEVN
     401  ELIDYYKQSN VLLDKDITGK KWENLIDEKY FLSGNGNPRE LLKSLVLSHR
     451  *

external links for Rsm23p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	YPL+
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YeastGFP
Aspergillus (AspGD)	BioPIXIE	MIPS
Candida (CGD)	CYC2008 (complexes)	Pfam domains
Candida (CandidaDB)	Complexome	YeastRC Structure Prediction (Seattle)
YGOB	DIP
YOGY	GeneMANIA

References cited on this page View Complete Literature Guide for Rsm23p

1)	Saveanu C, et al. (2001) Identification of 12 new yeast mitochondrial ribosomal proteins including 6 that have no prokaryotic homologues. J Biol Chem 276(19):15861-7
2)	Berger T, et al. (2000) The apoptosis mediator mDAP-3 is a novel member of a conserved family of mitochondrial proteins. J Cell Sci 113 ( Pt 20):3603-12
3)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41