UBX5/YDR330W Protein Information Help

Standard Name Ubx5p 1
Systematic Name Ydr330wp
ORF Classification Verified
Description UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p (1)
Name Description UBiquitin regulatory X 1
Experimental Data
Molecules/cell 6630 2
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 500
Molecular Weight (Da) 56,736
Isoelectric Point (pI) 4.38

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Ubx5p (InterPro)
Physical Interactions There are 29 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000006A19E | Q06682
MIPS: YDR330W
NCBI: 6320537 | 85544720 | 914992 | NP_010617.1
GenBank/EMBL/DDBJ: DAA12172.1 | U32517
Amino Acid Sequence (or in FASTA format)
 
       1  MSEGKVDEFM AITGADDAAI ATQFIEMADG NLNTAISLFF ENGGAALLSS
      51  NNTPTPSNST PMAPTSVDSD ADAQLAERLQ REAYQQQQPD QDYVRPPDEA
     101  RHEVLTETSG FPISYGGIGG RFEPLHRVND MFDEGRPESI FNQRLDDTNT
     151  NTYINDNSSD SLDSEEENDD DEYEYVEEPV IELDEDGNIK EYTKLVRKPK
     201  TISKEQKLAL LFRPPFSIMS KLDLDAAKQK ARAKQKWIMI NIQDSGIFQC
     251  QALNRDLWSS RPVKTIIKEN FVFLQYQYES RNAQPYLQFY HLNNKDDLPH
     301  IAILDPITGE RVKQWNRVVP IPEQFISEIN EFLASFSLDP KVPNPTVNEP
     351  LPKVDPTTLT EEQQMELAIK ESLNNNSSKS NQEEVPSTGE EQKRVQEPDP
     401  FSTIEARVHP EPPNKPGITT RIQIRTGDGS RLVRRFNALE DTVRTIYEVI
     451  KTEMDGFADS RFTLNDHQRE DLIDKLNMTI ADAGLKNSSL LLEKLDPEIE
     501  *

external links for Ubx5p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB DIP

YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Ubx5p
1) Schuberth C, et al.  (2004) Shp1 and Ubx2 are adaptors of Cdc48 involved in ubiquitin-dependent protein degradation. EMBO Rep 5(8):818-24
2) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41