TVP23/YDR084C Protein Information

Standard Name	Tvp23p 1
Systematic Name	Ydr084cp
ORF Classification	Verified
Description	Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern (1, 2)
Name Description	Tlg2-Vesicle Protein 1

Experimental Data
Molecules/cell	1040 3

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	199
Molecular Weight (Da)	23,148
Isoelectric Point (pI)	8.88

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Tvp23p (InterPro)
Transmembrane Domains	There are 3 total predicted transmembrane domains (TMHMM)
Physical Interactions	There are 16 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI000013A889 \| P38962 MIPS: YDR084C NCBI: 1431557 \| 398365491 \| 45269241 \| 558255 \| 577811 \| 731367 \| NP_010369.3 GenBank/EMBL/DDBJ: DAA11931.1 \| AY557674 \| X82086 \| Z46796 \| Z74380

Amino Acid Sequence (or in FASTA format)
1 MDQARNFYNT ILKSSHPLLL SFHLAGKAVP IVFYIIGSMF LNFTPQFITV 51 VLLLSFDFYL TKNITGRKLV QLRWWYDSTD VNKDSNFTFE SYKQYAPGPP 101 INAIDSKLFW WSMYVTPVIW GVFAVLCLLR LKIFYLILVI VAMCLTAWNT 151 YGFRCCDRWE PNSGQSDGQD TNNWFALPSV PGFENLSRLA NIQSFFQRQ*

Amino Acid Sequence (or in FASTA format)

       1  MDQARNFYNT ILKSSHPLLL SFHLAGKAVP IVFYIIGSMF LNFTPQFITV
      51  VLLLSFDFYL TKNITGRKLV QLRWWYDSTD VNKDSNFTFE SYKQYAPGPP
     101  INAIDSKLFW WSMYVTPVIW GVFAVLCLLR LKIFYLILVI VAMCLTAWNT
     151  YGFRCCDRWE PNSGQSDGQD TNNWFALPSV PGFENLSRLA NIQSFFQRQ*

external links for Tvp23p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	YPL+
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YeastGFP
Aspergillus (AspGD)	BioPIXIE	MIPS	YeastRC Public Image Repository
Candida (CGD)	CYC2008 (complexes)	Pfam domains
Candida (CandidaDB)	Complexome
YGOB	DIP
YOGY	GeneMANIA

References cited on this page View Complete Literature Guide for Tvp23p

1)	Inadome H, et al. (2005) Immunoisolaton of the yeast Golgi subcompartments and characterization of a novel membrane protein, Svp26, discovered in the Sed5-containing compartments. Mol Cell Biol 25(17):7696-710
2)	Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91
3)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41