RPL35A/YDL191W Protein Information Help

Standard Name Rpl35ap
Systematic Name Ydl191wp
Alias Sos1p
ORF Classification Verified
Description Ribosomal 60S subunit protein L35A; homologous to mammalian ribosomal protein L35 and bacterial L29; RPL35A has a paralog, RPL35B, that arose from the whole genome duplication (1, 2, 3, 4, 5)
Name Description Ribosomal Protein of the Large subunit
Gene Product L29 5 , L35A 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 120
Molecular Weight (Da) 13,909
Isoelectric Point (pI) 11.36

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rpl35ap (InterPro)
Physical Interactions There are 43 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000036C32 | P0CX84
MIPS: YDL191W
NCBI: 1004304 | 1431312 | 171218 | 270346351 | 270346366 | 338819294 | 49258863 | 6320010 | 6320065 | NP_010090.1 | NP_010145.1
GenBank/EMBL/DDBJ: DAA11722.1 | M82913 | X83276 | Z74239
Amino Acid Sequence (or in FASTA format)
 
       1  MAGVKAYELR TKSKEQLASQ LVDLKKELAE LKVQKLSRPS LPKIKTVRKS
      51  IACVLTVINE QQREAVRQLY KGKKYQPKDL RAKKTRALRR ALTKFEASQV
     101  TEKQRKKQIA FPQRKYAIKA *

external links for Rpl35ap
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB GeneMANIA

YOGY


References cited on this page View Complete Literature Guide for Rpl35ap
1) Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7
2) Vasconcelles MJ, et al.  (2001) Identification and characterization of a low oxygen response element involved in the hypoxic induction of a family of Saccharomyces cerevisiae genes. Implications for the conservation of oxygen sensing in eukaryotes. J Biol Chem 276(17):14374-84
3) Lecompte O, et al.  (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
4) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
5) Jenner L, et al.  (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67