SNU23/YDL098C Protein Information

Standard Name	Snu23p
Systematic Name	Ydl098cp
ORF Classification	Verified
Description	Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome (1, 2, 3, 4)
Name Description	Small NUclear ribonucleoprotein associated 2

Experimental Data
Molecules/cell	907 5

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	194
Molecular Weight (Da)	22,679
Isoelectric Point (pI)	8.73

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Snu23p (InterPro)
Physical Interactions	There are 49 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI00000530DF \| Q12368 MIPS: YDL098C NCBI: 1199551 \| 1431134 \| 6320105 \| 74645048 \| NP_010185.1 GenBank/EMBL/DDBJ: DAA11762.1 \| X95644 \| Z74146

Amino Acid Sequence (or in FASTA format)
1 MSNFGRRTWD REEYAEQARS GYDDRSLKAT LTPIELQALK SKYTNYDHLI 51 KGSLKDLNKR KLTANTESLS SFKRGKKFGF YCDICNLTFK DTLQYIDHLN 101 HKVHAIKFEN LFDEPLIIDI RDNDDVPQEE FELCYHNLIK DFVEVRSMET 151 QSKRKRLLDT DVEKAKKVAT KPSIESESKV SQMMGFSNFA TSKK*

Amino Acid Sequence (or in FASTA format)

       1  MSNFGRRTWD REEYAEQARS GYDDRSLKAT LTPIELQALK SKYTNYDHLI
      51  KGSLKDLNKR KLTANTESLS SFKRGKKFGF YCDICNLTFK DTLQYIDHLN
     101  HKVHAIKFEN LFDEPLIIDI RDNDDVPQEE FELCYHNLIK DFVEVRSMET
     151  QSKRKRLLDT DVEKAKKVAT KPSIESESKV SQMMGFSNFA TSKK*

external links for Snu23p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	Organelle DB
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YPL+
Aspergillus (AspGD)	BioPIXIE	MIPS	YeastGFP
Candida (CGD)	CYC2008 (complexes)	Pfam domains	YeastRC Public Image Repository
Candida (CandidaDB)	Complexome
YGOB	DIP
YOGY	GeneMANIA

References cited on this page View Complete Literature Guide for Snu23p

1)	Gottschalk A, et al. (1999) Identification by mass spectrometry and functional analysis of novel proteins of the yeast [U4/U6.U5] tri-snRNP. EMBO J 18(16):4535-48
2)	Stevens SW and Abelson J (1999) Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins. Proc Natl Acad Sci U S A 96(13):7226-31
3)	Stevens SW, et al. (2001) Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae. RNA 7(11):1543-53
4)	Stevens SW, et al. (2002) Composition and functional characterization of the yeast spliceosomal penta-snRNP. Mol Cell 9(1):31-44
5)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41