RPS21A/YKR057W Protein Information 
| Standard Name | Rps21ap |
|---|---|
| Systematic Name | Ykr057wp |
| Alias | Rps25p |
| ORF Classification | Verified |
| Description | Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21A has a paralog, RPS21B, that arose from the whole genome duplication (1, 2, 3) |
| Name Description | Ribosomal Protein of the Small subunit |
| Gene Product | S21A 4 , S21e 3 , S26A 4 , YS25 4 |
| Experimental Data | |
|---|---|
| Molecules/cell | 27400 5 |
| Click on image for expanded interactive view |
|---|
| Post-translational Modifications | PhosphoGRID | PhosphoPep Database |
|---|---|
| Domains/motifs | See the graphical view and list of proteins that share domains/motifs in common with Rps21ap (InterPro) |
| Physical Interactions | There are 16 total physical interactions (BioGRID) |
| Homologs | PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer |
| External Sequence Databases |
EBI: UPI0000134E91 | P0C0V8 MIPS: YKR057W NCBI: 2131127 | 313103683 | 364506117 | 364506155 | 398365233 | 4411 | 486517 | 84028229 | NP_012983.3 GenBank/EMBL/DDBJ: DAA09208.1 | X07811 | Z28282 | Z28283 |
external links for Rps21ap
| Homologs | Interaction Resources | Protein databases/Other | Localization Resources |
|---|---|---|---|
| BLASTP (NCBI) | BioGRID | SCOP Superfamily | YPL+ |
| Ashbya (AGD) | BOND | GPMdb (Mass Spec.) | YeastGFP |
| Aspergillus (AspGD) | BioPIXIE | MIPS | YeastRC Public Image Repository |
| YGOB | CYC2008 (complexes) | Pfam domains | |
| YOGY | Complexome | YeastRC Structure Prediction (Seattle) | |
| GeneMANIA |
References cited on this page View Complete Literature Guide for Rps21ap
| 1) | Lecompte O, et al. (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90 |
| 2) | Byrne KP and Wolfe KH (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61 |
| 3) | Jenner L, et al. (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67 |
| 4) | Planta RJ and Mager WH (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7 |
| 5) | Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41 |
