ELF1/YKL160W Protein Information Help

Standard Name Elf1p
Systematic Name Ykl160wp
ORF Classification Verified
Description Transcription elongation factor that contains a conserved zinc finger domain; implicated in the maintenance of proper chromatin structure in actively transcribed regions; deletion inhibits Brome mosaic virus (BMV) gene expression (1, 2)
Name Description ELongation Factor 2
Experimental Data
Molecules/cell 5860 3
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 145
Molecular Weight (Da) 16,157
Isoelectric Point (pI) 4.32

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Elf1p (InterPro)
Physical Interactions There are 35 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000013B742 | P36053
MIPS: YKL160W
NCBI: 407488 | 45270600 | 486279 | 549732 | 6322689 | NP_012762.1
GenBank/EMBL/DDBJ: DAA09005.1 | AY558355 | Z26877 | Z28160
Amino Acid Sequence (or in FASTA format)
 
       1  MGKRKKSTRK PTKRLVQKLD TKFNCLFCNH EKSVSCTLDK KNSIGTLSCK
      51  ICGQSFQTRI NSLSQPVDVY SDWFDAVEEV NSGRGSDTDD GDEGSDSDYE
     101  SDSEQDAKTQ NDGEIDSDEE EVDSDEERIG QVKRGRGALV DSDDE*

external links for Elf1p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome

YGOB DIP

YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Elf1p
1) Kushner DB, et al.  (2003) Systematic, genome-wide identification of host genes affecting replication of a positive-strand RNA virus. Proc Natl Acad Sci U S A 100(26):15764-9
2) Prather D, et al.  (2005) Identification and characterization of Elf1, a conserved transcription elongation factor in Saccharomyces cerevisiae. Mol Cell Biol 25(22):10122-35
3) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41