SRP102/YKL154W Protein Information

Standard Name	Srp102p 1
Systematic Name	Ykl154wp
ORF Classification	Verified
Description	Signal recognition particle (SRP) receptor beta subunit; involved in SRP-dependent protein targeting; anchors the alpha subunit, Srp101p to the ER membrane (1)
Name Description	Signal Recognition Particle 1

Experimental Data
Molecules/cell	8250 2

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	244
Molecular Weight (Da)	26,974
Isoelectric Point (pI)	7.89

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Srp102p (InterPro)
Transmembrane Domains	There are 1 total predicted transmembrane domains (TMHMM)
Signal Peptide(s)	There are 1 total predicted predicted signal peptide(s) (SignalP)
Physical Interactions	There are 49 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI0000135F57 \| P36057 MIPS: YKL154W NCBI: 29726745 \| 486267 \| 549728 \| 6322695 \| 693999 \| 99032473 \| 99032474 \| NP_012768.1 \| NM_001179720.1 GenBank/EMBL/DDBJ: DAA09010.1 \| Z26877 \| Z28154

Amino Acid Sequence (or in FASTA format)
1 MLSNTLIIAC LLVIGTTIAL IAVQKASSKT GIKQKSYQPS IIIAGPQNSG 51 KTSLLTLLTT DSVRPTVVSQ EPLSAADYDG SGVTLVDFPG HVKLRYKLSD 101 YLKTRAKFVK GLIFMVDSTV DPKKLTTTAE FLVDILSITE SSCENGIDIL 151 IACNKSELFT ARPPSKIKDA LESEIQKVIE RRKKSLNEVE RKINEEDYAE 201 NTLDVLQSTD GFKFANLEAS VVAFEGSINK RKISQWREWI DEKL*

Amino Acid Sequence (or in FASTA format)

       1  MLSNTLIIAC LLVIGTTIAL IAVQKASSKT GIKQKSYQPS IIIAGPQNSG
      51  KTSLLTLLTT DSVRPTVVSQ EPLSAADYDG SGVTLVDFPG HVKLRYKLSD
     101  YLKTRAKFVK GLIFMVDSTV DPKKLTTTAE FLVDILSITE SSCENGIDIL
     151  IACNKSELFT ARPPSKIKDA LESEIQKVIE RRKKSLNEVE RKINEEDYAE
     201  NTLDVLQSTD GFKFANLEAS VVAFEGSINK RKISQWREWI DEKL*

external links for Srp102p

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	Organelle DB
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YPL+
Aspergillus (AspGD)	BioPIXIE	MIPS	YeastGFP
Candida (CGD)	CYC2008 (complexes)	Pfam domains	YeastRC Public Image Repository
Candida (CandidaDB)	Complexome	YeastRC Structure Prediction (Seattle)
YGOB	DIP
YOGY	GeneMANIA

References cited on this page View Complete Literature Guide for Srp102p

1)	Ogg SC, et al. (1998) A functional GTPase domain, but not its transmembrane domain, is required for function of the SRP receptor beta-subunit. J Cell Biol 142(2):341-54
2)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41