YIL082W Protein Information

Systematic Name	Yil082wp
ORF Classification	Dubious
Description	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag (1, 2)

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	290
Molecular Weight (Da)	34,099
Isoelectric Point (pI)	8.69

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Post-translational Modifications	PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Yil082wp (InterPro)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI000006B830 \| Q99219 MIPS: YIL082W NCBI: 173087 \| 45269641 \| 577132 \| 74638320 GenBank/EMBL/DDBJ: AY557875 \| M23367 \| Z46728

Amino Acid Sequence (or in FASTA format)
1 MSFMDQIPGG GNYPKLPVEC LPNFPIQPSL TFRGRNDSHK LKNFISEIML 51 NMSMISWPND ASRIVYCRRH LLNPAAQWAN DFVQEQGILE ITFDTFIQGL 101 YQHFYKPPDI NKIFNAITQL SEAKLGIERL NQRFRKIWDR MPPDFMTEKA 151 AIMTYTRLLT KETYNIVRMH KPETLKDAME EAYQTTALTE RFFPGFELDA 201 DGDTIIGATT HLQEEYDSDY DSEDNLTQNR YVHTVRTRRS YNKPMSNHRN 251 RRNNNASREE CIKNRLCFYC KKEGHRLNEC RARKASSNRS *

Amino Acid Sequence (or in FASTA format)

       1  MSFMDQIPGG GNYPKLPVEC LPNFPIQPSL TFRGRNDSHK LKNFISEIML
      51  NMSMISWPND ASRIVYCRRH LLNPAAQWAN DFVQEQGILE ITFDTFIQGL
     101  YQHFYKPPDI NKIFNAITQL SEAKLGIERL NQRFRKIWDR MPPDFMTEKA
     151  AIMTYTRLLT KETYNIVRMH KPETLKDAME EAYQTTALTE RFFPGFELDA
     201  DGDTIIGATT HLQEEYDSDY DSEDNLTQNR YVHTVRTRRS YNKPMSNHRN
     251  RRNNNASREE CIKNRLCFYC KKEGHRLNEC RARKASSNRS *

external links for Yil082wp

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
Ashbya (AGD)	BOND	SCOP Superfamily	YPL+
YGOB	BioPIXIE	GPMdb (Mass Spec.)	YeastGFP
YOGY	CYC2008 (complexes)	MIPS
	Complexome	Pfam domains
	DIP
	GeneMANIA
	YeastRC Two-Hybrid (Seattle)

References cited on this page View Complete Literature Guide for Yil082wp

1)	Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78
2)	Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90