RPL34B/YIL052C Protein Information Help

Standard Name Rpl34bp
Systematic Name Yil052cp
ORF Classification Verified
Description Ribosomal 60S subunit protein L34B; homologous to mammalian ribosomal protein L34, no bacterial homolog; RPL34B has a paralog, RPL34A, that arose from the whole genome duplication (1, 2, 3, 4)
Name Description Ribosomal Protein of the Large subunit
Gene Product L34B 1 , L34e 4
Experimental Data
Molecules/cell 21000 5
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 121
Molecular Weight (Da) 13,641
Isoelectric Point (pI) 11.56

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rpl34bp (InterPro)
Physical Interactions There are 18 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000132FCF | P40525
MIPS: YIL052C
NCBI: 557816 | 6322137 | 731810 | NP_012212.1
GenBank/EMBL/DDBJ: DAA08495.1 | Z38060
Amino Acid Sequence (or in FASTA format)
 
       1  MAQRVTFRRR NPYNTRSNKI KVVKTPGGIL RAQHVKKLAT RPKCGDCGSA
      51  LQGISTLRPR QYATVSKTHK TVSRAYGGSR CANCVKERIV RAFLIEEQKI
     101  VKKVVKEQTE AAKKSEKKSK K*

external links for Rpl34bp
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
Aspergillus (AspGD) BioPIXIE MIPS YeastGFP
Candida (CGD) CYC2008 (complexes) Pfam domains YeastRC Public Image Repository
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB DIP

YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Rpl34bp
1) Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7
2) Lecompte O, et al.  (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
4) Jenner L, et al.  (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67
5) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41