UTP9/YHR196W Protein Information Help

Standard Name Utp9p 1
Systematic Name Yhr196wp
ORF Classification Verified
Description Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA (1)
Name Description U Three Protein 1
Experimental Data
Molecules/cell 20000 2
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 575
Molecular Weight (Da) 65,271
Isoelectric Point (pI) 4.57

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Utp9p (InterPro)
Physical Interactions There are 178 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000005302D | P38882
MIPS: YHR196W
NCBI: 458944 | 6321990 | 731765 | NP_012066.1
GenBank/EMBL/DDBJ: DAA06888.1 | U00030
Amino Acid Sequence (or in FASTA format)
 
       1  MGSSLDLVAS FSHDSTRFAF QASVAQKNNV DIYPLNETKD YVVNSSLVSH
      51  IDYETNDMKV SDVIFFGWCS DLIDTQSSNI KRKLDEDEGT GESSEQRCEN
     101  FFVNGFPDGR IVVYSSNGKD IVNIIKNKKE ILGADTDESD IWILDSDKVV
     151  KKLQYNNSKP LKTFTLVDGK DDEIVHFQIL HQNGTLLVCI ITKQMVYIVD
     201  PSKRRPSTKY SFEISDAVAC EFSSDGKYLL IANNEELIAY DLKEDSKLIQ
     251  SWPVQVKTLK TLDDLIMALT TDGKINNYKI GEADKVCSIV VNEDLEIIDF
     301  TPINSKQQVL ISWLNVNEPN FESISLKEIE TQGYITINKN EKNNADEADQ
     351  KKLEEKEEEA QPEVQHEKKE TETKINKKVS KSDQVEIANI LSSHLEANST
     401  EILDDLMSGS WTEPEIKKFI LTKINTVDHL SKIFLTISKS ITQNPWNEEN
     451  LLPLWLKWLL TLKSGELNSI KDKHTKKNCK HLKSALRSSE EILPVLLGIQ
     501  GRLEMLRRQA KLREDLAQLS MQEGEDDEIE VIEHSNVISN PLQDQASPVE
     551  KLEPDSIVYA NGESDEFVDA SEYKD*

external links for Utp9p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily Organelle DB
Ashbya (AGD) BOND GPMdb (Mass Spec.) YPL+
YGOB BioPIXIE MIPS YeastGFP
YOGY CYC2008 (complexes) Pfam domains YeastRC Public Image Repository

Complexome YeastRC Structure Prediction (Seattle)

DIP


GeneMANIA

References cited on this page View Complete Literature Guide for Utp9p
1) Dragon F, et al.  (2002) A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417(6892):967-70
2) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41