RRP3/YHR065C Protein Information Help

Standard Name Rrp3p 1
Systematic Name Yhr065cp
ORF Classification Verified
Description Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity (1)
Name Description Ribosomal RNA Processing 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 501
Molecular Weight (Da) 55,968
Isoelectric Point (pI) 9.91

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rrp3p (InterPro)
Physical Interactions There are 11 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI00001D4788 | P38712
MIPS: YHR065C
NCBI: 37362659 | 37675480 | 37675481 | 487961 | 81175193 | NP_011932.2 | NM_001179195.1
GenBank/EMBL/DDBJ: AAB68392.1 | AAQ97234.1 | AAQ97235.1 | DAA06758.1 | AY389302 | AY389303 | U00061
External Classifications EC: 3.6.4.- [Hydrolases, Acting on acid anhydrides, Acting on acid anhydrides; involved in cellular and subcellular movement]
EC: 3.6.4.13 [RNA helicase]
Amino Acid Sequence (or in FASTA format)
       1  MSKIVKRKEK KANDELTSLA EKIRAKALEN QKKLIEAEKE GGSESDSEED
      51  ATAEKKKVLK SKSKSTVSTQ NENTNEDESF ESFSELNLVP ELIQACKNLN
     101  YSKPTPIQSK AIPPALEGHD IIGLAQTGSG KTAAFAIPIL NRLWHDQEPY
     151  YACILAPTRE LAQQIKETFD SLGSLMGVRS TCIVGGMNMM DQARDLMRKP
     201  HIIIATPGRL MDHLENTKGF SLRKLKFLVM DEADRLLDME FGPVLDRILK
     251  IIPTQERTTY LFSATMTSKI DKLQRASLTN PVKCAVSNKY QTVDTLVQTL
     301  MVVPGGLKNT YLIYLLNEFI GKTMIIFTRT KANAERLSGL CNLLEFSATA
     351  LHGDLNQNQR MGSLDLFKAG KRSILVATDV AARGLDIPSV DIVVNYDIPV
     401  DSKSYIHRVG RTARAGRSGK SISLVSQYDL ELILRIEEVL GKKLPKESVD
     451  KNIILTLRDS VDKANGEVVM EMNRRNKEKI ARGKGRRGRM MTRENMDMGE
     501  R*                                                    

external links for Rrp3p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily LoQate
Ashbya (AGD) BOND GPMdb (Mass Spec.) Organelle DB
Candida (CGD) CYC2008 (complexes) MIPS YPL+
YGOB Complexome Pfam domains YeastGFP
YOGY DIP YeastRC Structure Prediction (Seattle)

GeneMANIA


IMP

References cited on this page View Complete Literature Guide for Rrp3p
1) O'Day CL, et al.  (1996) 18S rRNA processing requires the RNA helicase-like protein Rrp3. Nucleic Acids Res 24(16):3201-7