RPS8B/YER102W Protein Information

Standard Name	Rps8bp
Systematic Name	Yer102wp
ORF Classification	Verified
Description	Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8B has a paralog, RPS8A, that arose from the whole genome duplication (1, 2, 3, 4)
Name Description	Ribosomal Protein of the Small subunit 5
Gene Product	S14B 1 , S8B 1 , S8e 4 , YS9 1 , rp19 1

Experimental Data
Molecules/cell	14400 6

Predicted Sequence	Formatted Sequence or sequence in FASTA format
Length (a.a.)	200
Molecular Weight (Da)	22,489
Isoelectric Point (pI)	11.42

Click on image for expanded interactive view

Post-translational Modifications	PhosphoGRID \| PhosphoPep Database
Domains/motifs	See the graphical view and list of proteins that share domains/motifs in common with Rps8bp (InterPro)
Physical Interactions	There are 90 total physical interactions (BioGRID)
Homologs	PDB Homologs \| BLASTP \| BLASTP v. fungi \| Fungal Alignment \| Synteny Viewer
External Sequence Databases	EBI: UPI0000036C42 \| P0CX40 MIPS: YER102W NCBI: 124263220 \| 171727 \| 338819360 \| 51013099 \| 603340 \| 6319399 \| 6320949 \| NP_009481.1 \| NP_011028.1 GenBank/EMBL/DDBJ: DAA07763.1 \| AY692824 \| EF123143 \| J05637 \| U18839

Amino Acid Sequence (or in FASTA format)
1 MGISRDSRHK RSATGAKRAQ FRKKRKFELG RQPANTKIGA KRIHSVRTRG 51 GNKKYRALRI ETGNFSWASE GISKKTRIAG VVYHPSNNEL VRTNTLTKAA 101 IVQIDATPFR QWFEAHYGQT LGKKKNVKEE ETVAKSKNAE RKWAARAASA 151 KIESSVESQF SAGRLYACIS SRPGQSGRCD GYILEGEELA FYLRRLTAKK 201 *

Amino Acid Sequence (or in FASTA format)

       1  MGISRDSRHK RSATGAKRAQ FRKKRKFELG RQPANTKIGA KRIHSVRTRG
      51  GNKKYRALRI ETGNFSWASE GISKKTRIAG VVYHPSNNEL VRTNTLTKAA
     101  IVQIDATPFR QWFEAHYGQT LGKKKNVKEE ETVAKSKNAE RKWAARAASA
     151  KIESSVESQF SAGRLYACIS SRPGQSGRCD GYILEGEELA FYLRRLTAKK
     201  *

external links for Rps8bp

Homologs	Interaction Resources	Protein databases/Other	Localization Resources
BLASTP (NCBI)	BioGRID	SCOP Superfamily	YPL+
Ashbya (AGD)	BOND	GPMdb (Mass Spec.)	YeastGFP
Aspergillus (AspGD)	BioPIXIE	MIPS	YeastRC Public Image Repository
Candida (CGD)	CYC2008 (complexes)	Pfam domains
Candida (CandidaDB)	Complexome	YeastRC Structure Prediction (Seattle)
YGOB	GeneMANIA
YOGY

References cited on this page View Complete Literature Guide for Rps8bp

1)	Planta RJ and Mager WH (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7
2)	Lecompte O, et al. (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
3)	Byrne KP and Wolfe KH (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
4)	Jenner L, et al. (2012) Crystal structure of the 80S yeast ribosome. Curr Opin Struct Biol 22(6):759-67
5)	Mager WH, et al. (1997) A new nomenclature for the cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Nucleic Acids Res 25(24):4872-5
6)	Ghaemmaghami S, et al. (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41