RRT13/YER066W Protein Information Help

Standard Name Rrt13p 1
Systematic Name Yer066wp
ORF Classification Uncharacterized
Description Putative protein of unknown function; non-essential gene identified in a screen for mutants with decreased levels of rDNA transcription (1, 2)
Name Description Regulator of rDNA Transcription 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 185
Molecular Weight (Da) 20,686
Isoelectric Point (pI) 6.23

Click on image for expanded interactive view
pbrowse

Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rrt13p (InterPro)
Physical Interactions There are 2 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000013ACA8 | P40042
MIPS: YER066W
NCBI: 603302 | 6320909 | 731473 | NP_010988.1 | NM_001178957.1
GenBank/EMBL/DDBJ: DAA07725.1 | U18813
Amino Acid Sequence (or in FASTA format)
 
       1  MKCLYILSGH TDRIYSTIYD HERKRCISAS MDTTIRIWDL ENIRNNGECS
      51  YATNSASPCA KILGAMYTLR GHRALVGLLG LSDKFLVSAS VDGSIRCWDA
     101  NTYFLKHFFD HTQLNTITAL HVSDEVLVSG SEGLLNIYDL NSGLLVRSDT
     151  LSGADNVWNV SFKDNTLVAA VERDKRNLLE ILDFS*

external links for Rrt13p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
YGOB BioPIXIE MIPS
YOGY CYC2008 (complexes) Pfam domains

Complexome YeastRC Structure Prediction (Seattle)

DIP


GeneMANIA


YeastRC Two-Hybrid (Seattle)

References cited on this page View Complete Literature Guide for Rrt13p
1) Hontz RD, et al.  (2009) Genetic Identification of Factors That Modulate Ribosomal DNA Transcription in Saccharomyces cerevisiae. Genetics 182(1):105-19
2) Fisk DG, et al.  (2006) Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Yeast 23(12):857-65