VBA2/YBR293W Protein Information Help

Standard Name Vba2p 1
Systematic Name Ybr293wp
ORF Classification Verified
Description Permease of basic amino acids in the vacuolar membrane (1)
Name Description Vacuolar Basic Amino acid transporter 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 474
Molecular Weight (Da) 51,676
Isoelectric Point (pI) 10.53

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Vba2p (InterPro)
Transmembrane Domains There are 12 total predicted transmembrane domains (TMHMM)
Signal Peptide(s) There are 1 total predicted predicted signal peptide(s) (SignalP)
Physical Interactions There are 7 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000013A284 | P38358
MIPS: YBR293W
NCBI: 398365923 | 51012711 | 536750 | 586361 | NP_009852.3
GenBank/EMBL/DDBJ: DAA07407.1 | AY692630 | Z36162
External Classifications TC: 2.A.1.3 [The Drug:H+ Antiporter-2 (14 Spanner) (DHA2) Family]
Amino Acid Sequence (or in FASTA format)
 
       1  MSISNWITTA YLITSTSFQP LYGSFSDALG RRNCLFFANG AFTIGCLACG
      51  FSKNIYMLSF MRALTGIGGG GLITLSTIVN SDVIPSSKRG IFQAFQNLLL
     101  GFGAICGASF GGTIASSIGW RWCFLIQVPI SVISSILMNY YVPNQKEYNR
     151  QNSSIFQNPG KILRDIDVMG SILIITGLTL QLLYLSLGCS TSKLSWTSPS
     201  VLLLLVGSVI ILLLFILHER KTSARAIIPM ELVNSSYSVV VLSISILVGF
     251  ASYAYLFTLP LFFQIVLGDS TAKAGLRLTI PSLFTPVGSL ITGFSMSKYN
     301  CLRLLLYIGI SLMFLGNFLF LFIEKTSPNW LIGLFLIPAN LGQGITFPTT
     351  LFTFIFMFSK SDQATATSTL YLFRSIGSVW GVAISAGVIQ LSFAGLLRSN
     401  LKGLLDENKI KKLIVQLSAN SSYIGSLHGE VKNTVIKSFD EATKRAHLMS
     451  TLLSSLALIL CILKDNLAKP KTRR*

external links for Vba2p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Aspergillus (AspGD) BioPIXIE MIPS
YGOB CYC2008 (complexes) Pfam domains
YOGY Complexome TCDB

DIP YeastRC Structure Prediction (Seattle)

GeneMANIA

References cited on this page View Complete Literature Guide for Vba2p
1) Shimazu M, et al.  (2005) A family of basic amino acid transporters of the vacuolar membrane from Saccharomyces cerevisiae. J Biol Chem 280(6):4851-7