EDS1/YBR033W Protein Information Help

Standard Name Eds1p 1, 2
Systematic Name Ybr033wp
ORF Classification Uncharacterized
Description Putative zinc cluster protein, predicted to be a transcription factor; not an essential gene; EDS1 has a paralog, RGT1, that arose from the whole genome duplication (2, 3, 4)
Name Description Expression Dependent on Slt2 2
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 919
Molecular Weight (Da) 103,396
Isoelectric Point (pI) 8.63

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Eds1p (InterPro)
Physical Interactions There are 2 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000013A3BC | P38073
MIPS: YBR033W
NCBI: 498760 | 536248 | 586482 | 6319507 | NP_009589.1
GenBank/EMBL/DDBJ: DAA07153.1 | X76078 | Z35902
Amino Acid Sequence (or in FASTA format)
 
       1  MSHHVPNLYG TPIRDPHERK RNSASMGEVN QSVSSRNCER GSEKGTKQRK
      51  KASHACDQCR RKRIKCRFDK HTGVCQGCLE VGEKCQFIRV PLKRGPAKKR
     101  GSVVSIEKFS SDNDPLQYRP RTHSYPMNSG NNYLPSLARN SSFPSISSLF
     151  VPSITAQSQQ FVKVPYDDIK RRSSLAILGS DSSISTEFGG NYRLDENLNV
     201  RQEGKDIVAK GMITPVEEMG ACSSNVRRQG SQSLPIQEQR ASPYINPFIS
     251  GRSRLSSLSY TSEATTSEGN TQGKNQCMLT PNSVRSIEKE RLNSLTAGFP
     301  NKKLGTDGRS DKWDKNSTWK PVYRSSNPSH PSTEKNVSLN QEASAKPLML
     351  GTYRQFDATS FYKVLGIYYN FFHINFPVIP INKSKFTDML DPEKPNVIDE
     401  IRQINNEIIQ CFKTALEVLV FCKIKQRRSS KSTKSWSRDS LCDFQKGLYY
     451  IQNFNKCIAD CFQSLITIKP VLKQNSSVIP SRIKFIYFST IIVLNFILIL
     501  AGEESSLLLG PSVGVFNEFQ AHKLFLPFQN TSPMLLLNSN EESGDEILDY
     551  AVLFKRLYIL LNILDTLQSF RLGQPKLINL NFGSAIETYF SDKTGHNQVV
     601  EKAPVALDNI LRNLKLGEFI TYFVLNRKSL QVNVPHHLLF TNQTDYGEFA
     651  VEKGEHDNIA GKFETLLKKK EILIRKLLNI EQKNDHILEN CCNSDAEMKN
     701  IGELVCSMIT LVSGILDSIT NMNAENSVDL DSKPLPNAYF AQDSEEELMS
     751  PTQSITSNLA SEENTRCTTK DLMGTVSIFM LPMVEECYNI ISLIGPIPTT
     801  LISLYIRNGN MAKGINDRIM TLSTALNELV QITALFNTLE PFRKNAHDRA
     851  KRYYVSATSS TGCYESVMKS MYSGKCAASN ASNVAPSEEE NKKILKKFAD
     901  IGWKLMDDSE LGCCCCFFN*

external links for Eds1p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
YGOB BioPIXIE MIPS
YOGY CYC2008 (complexes) Pfam domains

Complexome YeastRC Structure Prediction (Seattle)

DIP


GeneMANIA

References cited on this page View Complete Literature Guide for Eds1p
1) Vidan, S. and Snyder, M.  (2001) personal communication
2) MacPherson S, et al.  (2006) A fungal family of transcriptional regulators: the zinc cluster proteins. Microbiol Mol Biol Rev 70(3):583-604
3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
4) Yang Y, et al.  (2010) Identifying cooperative transcription factors by combining ChIP-chip data and knockout data. Cell Res 20(11):1276-8