RRN10/YBL025W Protein Information Help

Standard Name Rrn10p
Systematic Name Ybl025wp
ORF Classification Verified
Description Protein involved in promoting high level transcription of rDNA, subunit of UAF (upstream activation factor) for RNA polymerase I (1, 2, 3)
Name Description Regulation of RNA polymerase I 2
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 145
Molecular Weight (Da) 16,505
Isoelectric Point (pI) 4.95

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Rrn10p (InterPro)
Physical Interactions There are 20 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000134A5D | P38204
MIPS: YBL025W
NCBI: 1276909 | 45270810 | 536025 | 586409 | 602893 | 6319446 | NP_009528.1
GenBank/EMBL/DDBJ: DAA07095.1 | AY558460 | U43682 | X77291 | Z35786
Amino Acid Sequence (or in FASTA format)
 
       1  MDRNVYEACS NIIKEFGTHV VSADEVLAEK IDNAVPIPFK TREEIDADVE
      51  KDRNEGVFEG NIIPDIDLRV VHYYATQLCL NKYPHLINAF DETSLITLGL
     101  LIEKWVKDYL TSIQTEQGRQ SKVIGKGPCE FISKHIDYRH APGNI*

external links for Rrn10p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
YGOB BioPIXIE MIPS YeastRC Public Image Repository
YOGY CYC2008 (complexes) Pfam domains

Complexome


DIP


GeneMANIA


YeastRC Two-Hybrid (Seattle)

References cited on this page View Complete Literature Guide for Rrn10p
1) Steffan JS, et al.  (1996) The role of TBP in rDNA transcription by RNA polymerase I in Saccharomyces cerevisiae: TBP is required for upstream activation factor-dependent recruitment of core factor. Genes Dev 10(20):2551-63
2) Keys DA, et al.  (1996) Multiprotein transcription factor UAF interacts with the upstream element of the yeast RNA polymerase I promoter and forms a stable preinitiation complex. Genes Dev 10(7):887-903
3) Keener J, et al.  (1998) Reconstitution of yeast RNA polymerase I transcription in vitro from purified components. TATA-binding protein is not required for basal transcription. J Biol Chem 273(50):33795-802