PEP1/YBL017C Protein Information Help

Standard Name Pep1p
Systematic Name Ybl017cp
Alias Vps10p 1, 2 , Vpt1p 3
ORF Classification Verified
Description Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments (4, 5, 6)
Name Description carboxyPEPtidase Y-deficient 7
Experimental Data
Molecules/cell 7210 8
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 1,579
Molecular Weight (Da) 177,776
Isoelectric Point (pI) 4.59

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Pep1p (InterPro)
Transmembrane Domains There are 1 total predicted transmembrane domains (TMHMM)
Signal Peptide(s) There are 1 total predicted predicted signal peptide(s) (SignalP)
Physical Interactions There are 41 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI0000053293 | P32319
MIPS: YBL017C
NCBI: 3303 | 417462 | 497641 | 536009 | 6319454 | NP_009536.1
GenBank/EMBL/DDBJ: DAA07103.1 | U07621 | X68577 | Z35778
Amino Acid Sequence (or in FASTA format)
       1  MILLHFVYSL WALLLIPLTN AEEFTPKVTK TIAQDSFDIL SFDDSNTLIR
      51  KQDTSVTISF DDGETWEKVE GIEGEITWIY IDPFNRHDRA VATAMNGSYL
     101  YITNDQGKSW ERITLPDSGE SISPRECYIE THPLNKNYFL AKCNYCEKTE
     151  VNNDNEENSG DEEGQFEIFN ITRCTDKVFA SNDGGKSFSE IKSSLERNEN
     201  SPISISDCGF AKTSKDSDLE SSDTSIICLF QNMQLIMDEF SSPYTESKLV
     251  LTTDWGKSLK EFDQFKDKVV NGYRILKSHM VVLTQGDRYN DMSSMDVWVS
     301  NDLSNFKMAY MPTQLRHSMQ GEIYEDAMGR IILPMSRERS DQEEDKGIVS
     351  EILISDSQGL KFSPIPWTAN EVFGYINFYQ PTYLKGTMIA SLYPLSRRRN
     401  RKGKAKGVKS KGVTKISVDN GLTWTMLKVV DPDNADSFDC DITDFENCSL
     451  QNMFYTREGS TPTAGILMTT GIVGDGSVFD WGDQRTFISR DGGLTWKLAF
     501  DFPCLYAVGD YGNVIVAIPY NADEDDDPQS EFYYSLDQGK TWTEYQLETT
     551  IYPNEVMNTT PDGSGAKFIL NGFTLAHMDG TTNFIYAIDF STAFNDKTCE
     601  ENDFEDWNLA EGKCVNGVKY KIRRRKQDAQ CLVKKVFEDL QLFETACDKC
     651  TEADYECAFE FVRDATGKCV PDYNLIVLSD VCDKTKKKTV PVKPLQLVKG
     701  DKCKKPMTVK SVDISCEGVP KKGTNDKEIV VTENKFDFKI QFYQYFDTVT
     751  DESLLMINSR GEAYISHDGG QTIKRFDSNG ETIIEVVFNP YYNSSAYLFG
     801  SKGSIFSTHD RGYSFMTAKL PEARQLGMPL DFNAKAQDTF IYYGGKNCES
     851  ILSPECHAVA YLTNDGGETF TEMLDNAIHC EFAGSLFKYP SNEDMVMCQV
     901  KEKSSQTRSL VSSTDFFQDD KNTVFENIIG YLSTGGYIIV AVPHENNELR
     951  AYVTIDGTEF AEAKFPYDED VGKQEAFTIL ESEKGSIFLH LATNLVPGRD
    1001  FGNLLKSNSN GTSFVTLEHA VNRNTFGYVD FEKIQGLEGI ILTNIVSNSD
    1051  KVAENKEDKQ LKTKITFNEG SDWNFLKPPK RDSEGKKFSC SSKSLDECSL
    1101  HLHGYTERKD IRDTYSSGSA LGMMFGVGNV GPNLLPYKEC STFFTTDGGE
    1151  TWAEVKKTPH QWEYGDHGGI LVLVPENSET DSISYSTDFG KTWKDYKFCA
    1201  DKVLVKDITT VPRDSALRFL LFGEAADIGG SSFRTYTIDF RNIFERQCDF
    1251  DITGKESADY KYSPLGSKSN CLFGHQTEFL RKTDENCFIG NIPLSEFSRN
    1301  IKNCSCTRQD FECDYNFYKA NDGTCKLVKG LSPANAADVC KKEPDLIEYF
    1351  ESSGYRKIPL STCEGGLKLD APSSPHACPG KEKEFKEKYS VSAGPFAFIF
    1401  ISILLIIFFA AWFVYDRGIR RNGGFARFGE IRLGDDGLIE NNNTDRVVNN
    1451  IVKSGFYVFS NIGSLLQHTK TNIAHAISKI RGRFGNRTGP SYSSLIHDQF
    1501  LDEADDLLAG HDEDANDLSS FMDQGSNFEI EEDDVPTLEE EHTSYTDQPT
    1551  TTDVPDTLPE GNEENIDRPD STAPSNENQ*                      

external links for Pep1p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
Aspergillus (AspGD) BioPIXIE MIPS YeastRC Public Image Repository
Candida (CGD) CYC2008 (complexes) Pfam domains
Candida (CandidaDB) Complexome YeastRC Structure Prediction (Seattle)
YGOB DIP

YOGY GeneMANIA

References cited on this page View Complete Literature Guide for Pep1p
1) Robinson JS, et al.  (1988) Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases. Mol Cell Biol 8(11):4936-48
2) Rothman JH, et al.  (1989) Characterization of genes required for protein sorting and vacuolar function in the yeast Saccharomyces cerevisiae. EMBO J 8(7):2057-65
3) Bankaitis VA, et al.  (1986) Isolation of yeast mutants defective in protein targeting to the vacuole. Proc Natl Acad Sci U S A 83(23):9075-9
4) Cereghino JL, et al.  (1995) The cytoplasmic tail domain of the vacuolar protein sorting receptor Vps10p and a subset of VPS gene products regulate receptor stability, function, and localization. Mol Biol Cell 6(9):1089-102
5) Cooper AA and Stevens TH  (1996) Vps10p cycles between the late-Golgi and prevacuolar compartments in its function as the sorting receptor for multiple yeast vacuolar hydrolases. J Cell Biol 133(3):529-41
6) Marcusson EG, et al.  (1994) The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene. Cell 77(4):579-86
7) Jones EW  (1977) Proteinase mutants of Saccharomyces cerevisiae. Genetics 85(1):23-33
8) Ghaemmaghami S, et al.  (2003) Global analysis of protein expression in yeast. Nature 425(6959):737-41