LDB7/YBL006C Protein Information Help

Standard Name Ldb7p 1
Systematic Name Ybl006cp
Alias Rsc14p 2
ORF Classification Verified
Description Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Npl6p, and Htl1p to form a module important for a broad range of RSC functions (2)
Name Description Low Dye Binding 1
Predicted Sequence Formatted Sequence or sequence in FASTA format
Length (a.a.) 180
Molecular Weight (Da) 19,792
Isoelectric Point (pI) 9.32

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Post-translational Modifications PhosphoGRID | PhosphoPep Database
Domains/motifs See the graphical view and list of proteins that share domains/motifs in common with Ldb7p (InterPro)
Physical Interactions There are 16 total physical interactions (BioGRID)
Homologs PDB Homologs | BLASTP | BLASTP v. fungi | Fungal Alignment | Synteny Viewer
External Sequence Databases EBI: UPI000034F5C0 | P38210
MIPS: YBL006C
NCBI: 1680409 | 41629675 | 535988 | 85681875 | NP_009547.2
GenBank/EMBL/DDBJ: DAA07114.1 | S47695 | Z35767
Amino Acid Sequence (or in FASTA format)
 
       1  MSGSNMGYYD VLAGLSALEK SSQVVFSATE LQQLTQQSHA TDKGIEGSEN
      51  SKAKVSKPKR VAVHGYLGGK VSLADAAQVE YEVGHSLLGS YVPRQQLEAL
     101  SSVDFSHHFH RTLECKAALE THDVFLAGAG QLSLPFQSHI ESPRNSEAKR
     151  KRKVIICKRC QSRFIGSHRR SQLREHACVD *

external links for Ldb7p
Homologs Interaction Resources Protein databases/Other Localization Resources
BLASTP (NCBI) BioGRID SCOP Superfamily YPL+
Ashbya (AGD) BOND GPMdb (Mass Spec.) YeastGFP
YGOB BioPIXIE MIPS
YOGY CYC2008 (complexes) Pfam domains

Complexome


DIP


GeneMANIA

References cited on this page View Complete Literature Guide for Ldb7p
1) Corbacho I, et al.  (2004) Identification of low-dye-binding (ldb) mutants of Saccharomyces cerevisiae. FEMS Yeast Res 4(4-5):437-44
2) Wilson B, et al.  (2006) The RSC chromatin remodeling complex bears an essential fungal-specific protein module with broad functional roles. Genetics 172(2):795-809